| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1666 |
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| Symbol | |
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| ID | 3740516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1870554 |
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| End bp | 1872194 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637778951 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_384622 |
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| Protein GI | 78222875 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.13133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTTC AAAGACGTAC CACCTTCAAC AAAAGCCGGC GTCAATGCGT AGTGCTGGCA
GCCGTATTCA TCCTCTCTGG TTGCATCAAG GTGGGGCCGG ATTTTCACCG GCCAGATGTC
GCGGTTCCAT CTGACTGGAC GGAGGCAGGA GAAAACCAGG GGGAAACCGG CCCCGCGGAT
TATCGCAGTT GGTGGCGGGT ATTCAACGAC CCGATCCTCG ACCGCCTTAT TGACCTCGCT
TACCGTGAGA ACCTCACCCT CAGGATCGCC GGAGCGCGAG TGCTCGAAGC CAGGGCGCTG
CTCGGCATAG TGGTCGGAGA GTATTTCCCG CAGACCCAGC AGGGCTTTGG CTCGGTTCAC
TACAACAGGA CAAGCCGGGG GTCTGTGCAG ACCGGCACCC AACAATCTTC CGCCAGCCAA
AGCAGTGCGT CGCTCGGAGG TGGCTCCGGG TTATCGTTCT GGCAATCGCA GATCGGGTTG
ACGGCCAGTT GGGAACTCGA TTTCTGGGGC AAGTACAGGC GGGCCATCGA ATCGGCCGAT
GCAAGCTGGC TTGCCTCTGT GGCCGACTAC GACAATGCAC TTGTGGCTCT TACGGCGGAT
GTCGCCAATT CCTACATAAC CATCAGGACC CTGGAAACGC GGCTCGACAT TGCCCGCCGG
AACACGCAAA CCCAGAGAGA GAACCTGAAC ATCGCCGAAG CCCGGTTCAA GTACGGCACA
GCAACGCAGC TGGATCTGGA TCAGGCAGAA ACTTCGCTCA ATACCACCCT TGCCACGACC
CCCTCCCTGG AAGCGCAACT CCGGCAGACA AAACACGGCC TCAGCGTCCT GTTGGGAATG
GCGCCGGGCG ATCTGTCCGG CTATCTGAAT GGTCCTGCCA CTATCCCCGT CTCTCCCCCC
CAGGTTGTGT TCGGCATCCC GGCCGACCTG CTACGCCGCC GGCCCGATAT CCGCGCCGCG
GAACACCGTG CAGCGGCCCA GAGCGCCCAG ATCGGCGTGG CAAAGGCTGA CCTCTATCCC
GCTTTCTCCC TCTCCGGCAC GTTTGGTTTC CTCTCAACCG ATATCGGCGG TGCCAGCCTG
AGCGACATGT TCAACTGGAG CAGCCGTTTC ATACAGGCAG GCCCTTCGTT CCAGTGGAAC
ATCCTCAATT ACGGCCGGAT TTCGAACAAT GTCCGGCTCC AGGATGCGCG GCTCCAGGAA
CTGCTCATCA CCTACCAGAA CATGGTGCTC ACCGCGCAGC AGGAGGTTGA GGACAACCTG
GTGGCCTTCC TGCGGGCCCG CGACCGGGCC GAATTCCTGG CGCGGAGCAC AGCCGCTGCG
GCGAGATCTC TCAATCTCGC GGTCCTCCAG TATCAGCAGG GGATCAAGGA CTTCACCACG
GTACTTATCG CGCAGCAGTC CCTCTTGAAT GAGCAGGACA GCCTGGCCAC AACCATGGGC
AGCATCGCGA GCAGTCTGGT TGGTGTGTAC CGGGCACTGG GGGGCGGTTG GGAGATACGG
GAAGGAAAAG AACTGGTTCC CCCTGAGATC AGAAAAGAAA TGGAACAGCG AACCGATTGG
GGAAAGCTCC TTGCCCCGGC GTCATACAAT CCGCCCGCCC CCCCGGAGCA CAAGCCAGGA
GTCCGGGGGC CGGACTGGTG A
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| Protein sequence | MFVQRRTTFN KSRRQCVVLA AVFILSGCIK VGPDFHRPDV AVPSDWTEAG ENQGETGPAD
YRSWWRVFND PILDRLIDLA YRENLTLRIA GARVLEARAL LGIVVGEYFP QTQQGFGSVH
YNRTSRGSVQ TGTQQSSASQ SSASLGGGSG LSFWQSQIGL TASWELDFWG KYRRAIESAD
ASWLASVADY DNALVALTAD VANSYITIRT LETRLDIARR NTQTQRENLN IAEARFKYGT
ATQLDLDQAE TSLNTTLATT PSLEAQLRQT KHGLSVLLGM APGDLSGYLN GPATIPVSPP
QVVFGIPADL LRRRPDIRAA EHRAAAQSAQ IGVAKADLYP AFSLSGTFGF LSTDIGGASL
SDMFNWSSRF IQAGPSFQWN ILNYGRISNN VRLQDARLQE LLITYQNMVL TAQQEVEDNL
VAFLRARDRA EFLARSTAAA ARSLNLAVLQ YQQGIKDFTT VLIAQQSLLN EQDSLATTMG
SIASSLVGVY RALGGGWEIR EGKELVPPEI RKEMEQRTDW GKLLAPASYN PPAPPEHKPG
VRGPDW
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