| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1653 |
|---|
| Symbol | gpmA |
|---|
| ID | 3740503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1858881 |
|---|
| End bp | 1859624 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637778938 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_384609 |
|---|
| Protein GI | 78222862 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0588] Phosphoglycerate mutase 1 |
|---|
| TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.00239487 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.883975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TCGTTTTGCT TCGTCACGGC GAAAGCGTCT GGAACAGGGA GAACCGTTTC
ACCGGCTGGA CCGATGTGGG GCTCAGCGAG AAGGGGATCG AGGAGGCAAT CAGTGCCGGG
CGCACCCTGA AAGAAGAAGG GTTTGTTTTC GACGTGGCCT ACACGTCGGT CCTCAAGCGG
GCCATCAAGA CCCTCTGGCT CGTCCTGGAA GAGATGGATC TCATGTGGAT CCCGGAATAC
CGCCACTGGA GGCTCAACGA GCGTCACTAC GGAGCGCTCC AGGGGCTCAA CAAGGCGGAG
ACCGCCGAAC GGCACGGCAT GGAGCAGGTC ATGATCTGGC GCCGCAGTTA CGATATCCCG
CCGCCTCCCC TGACCCCCGA CGATCAGCGG TTTCCGGGAA GCGATCCTCG CTATGCATCA
CTTTTACCCG AGGAGTTACC ACTCACCGAA TCCCTCAAGG ACACGGTCGC CCGTTTTCTT
CCCTACTGGC ATGAAACCAT CGCCCCCGCC GTAAAAGAAG GGAAACGGGT TCTCGTCACC
GCCCACGGCA ACAGCCTGCG GGCCCTTGTA AAATACCTGG ATCTGGTCTC TGACTCCGAA
ATCGTCAACC TCAATATTCC CACCGGCATT CCCCTTGTCT ACGAACTAAC GGATAACATG
ACACCCATCA GGAGCTACTA TCTCGGTGAT CCGGATGACG TGGCCAGGGC AAGCAGGATG
GTGGCGGATC AGATAAAGAA GTAA
|
|---|
| Protein sequence | MKKLVLLRHG ESVWNRENRF TGWTDVGLSE KGIEEAISAG RTLKEEGFVF DVAYTSVLKR
AIKTLWLVLE EMDLMWIPEY RHWRLNERHY GALQGLNKAE TAERHGMEQV MIWRRSYDIP
PPPLTPDDQR FPGSDPRYAS LLPEELPLTE SLKDTVARFL PYWHETIAPA VKEGKRVLVT
AHGNSLRALV KYLDLVSDSE IVNLNIPTGI PLVYELTDNM TPIRSYYLGD PDDVARASRM
VADQIKK
|
|---|
| |