| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1652 |
|---|
| Symbol | |
|---|
| ID | 3740502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1855680 |
|---|
| End bp | 1858793 |
|---|
| Gene Length | 3114 bp |
|---|
| Protein Length | 1037 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637778937 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_384608 |
|---|
| Protein GI | 78222861 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.257724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG CCGAGGTTTT CATCCGGCGG CCGGTCATGA CGAGCCTCGT CATGCTGGCT
GTCATGCTCT TCGGTCTCCT CGCCTACAGC AAGCTGCCGG TCAACGACCT TCCCACCGTC
GACTATCCGA CCATCCAGGT TTCCGCCAGC CTTCCCGGCG CCAACCCCGA CACCATGGCC
GCGTCGGTGG CGCTCCCCCT GGAGCGGGAG TTCTCAACCA TAGCCGGCGT GGACTCCATG
AACTCCACCA ACGGTCTCGG AACGTCCCGC ATCACCATCA AATTCACCCT GGAGCGCGAC
ATCGACGCCG CCGCCCAGGA TGTCCAGGCA GCCATCTCCC GGGCCCAACG CCAGCTCCCC
CAAGACATGC CGGCTCCACC GTCGTTCCAG AAGGTTAACC CGGCGGACCA GGCAGTTCTC
TATCTGGCCC TCAGCTCGCC GACGCTTCCC CTGTCAACGG TCAATGACTA TGCCGAAGCC
ATGATCGCCC AGCGGATTTC CATGGTTAAC GGCGTGGCCT CGGTGCAGGT CAACGGTTCC
CAGAAGTACG CGGTGCGGGT CCAGGTGGAC CCCAAGGCGC TTGCGGCCCG CAAGATCGGC
ATCGACGAGG TGGCCCAGGC CCTGGAGCGC GGAAACGTGA ACCTCCCCAC CGGCACCCTC
CAGGGAAAGC ACGAGGCCCT AACGATCCAG ACCAGCGGCC AGCTCTATAG CGCCAAGGAG
TATGAGCCGC TCATCGTTGC CTACCGCAAC GGTTCGCCGG TCCGCCTCGG GGAGATCGGC
AAGGTCATCG ACAGTGTGGA GAACGACAAG GTTGCCGGCT GGTACAAGCA GACCCGCGCC
ATCATCCTCG CCATCCAGCG CCAGCCCGGC ACCAACACCA TCGAGGTGGT GAACCGTATC
AAGGAGCTGA TTCCCCACTT CCGCTCGCAA CTCCCCGCCT CGGTGGACCT GAACATCCTT
TTCGACCGGA CCGGGGGGAT CAAGGAGTCG GTGGCCGACG TGAAGTTCAC CATGATGCTC
ACCATCTGTC TCGTCATCCT GGTGATTTTC CTCTTTCTGC GCAACCTCCC CGCCACACTG
ATTCCGAGCC TCGCCCTGCC ACTCTCCATC GTCGGAGCCT TTTCAGCCAT GTACCTGATG
GGGTTCTCGG TCAACAACAT AACCCTCATG GCCCTGACCC TTTCGGTGGG CTTCGTGGTG
GACGACGCCA TTGTCATGCT GGAGAACATC GTTCGACACC TGGAGAAGGG AGAGGACCCC
AGGGAGGCGT CGTTGCGCGG CTCCCGGGAG ATCGGCTTCA CCATTGTCTC CATGACCATT
TCGCTGGTGG CGGTCTTCAT TCCGGTTCTC TTCATGCAGG GGATGCTCGG TCGGCTCCTC
CACGAATTCG CCGTCACCAT CAGCCTAGCG ATCCTCATCT CCGGTTTCGT TTCCCTCTCG
CTCACCCCCA TGCTCTGCAG CCGCTTCCTC CGTCCCCATG GCGAGCAGCG CCACGGCCGG
TTCTACAATT TCATGGAGCG CTTCTTCAAC GGCATGTACC GCTTCTATGA AGTGACCCTG
GCGCGAGTCC TGAGGCTTCG CCGGACGGTG CTGGCCGGCA CGCTGGTCTT GACGCTCCTC
ACCATCTGGC TCTTTACCAA GGTACCCACG GGCCTGTTGC CGAGCGACGA CATCGGTGCC
ATCTTCGCCA TGACCGAAGG GGCCCAGGGA ATCTCCTTCG AGGAGATGAA GGCCAAGCAG
CAGCAACTGG CGGCCATCGT GCTCCAGGAC CCGAACGTGG AGGCGTTCAT GTCGACGGCG
GGCGCCAGCG GGAGCCGTGT GTCGTCCAAC TCGGGTTTCA TGTTCATCCG CCTCAAGCCC
CGCCAGGAGC GGAAGCTGAA CGCCGATCAG GTGATTCAGC AGTTGCGTCC CAAGGTAATG
GGGGTGCCGG GGATTGTCAT GTTCCTCCAG AACCCGCCGC CGATCCGCCT GGAGGCCCGG
CTGGCGAAAA GCCAGTACCA GTTCGTGCTC CAGAGCCCCG ACACCGAGGA TCTCTACGCG
CGCGCGGCCG AACTGGAGGC AAAGCTGAAG CAGGTGCCGT TGCTGCTGGA CGTGACGAGC
GACCTTCAGC TTCAGAATCC ACAGGTTCAG CTGGACATCG ACCGGGACAA GGCATCGGCC
CTCGGGGTCA CCGCCCATCA GGTAGAGGAC GCACTGTACT ACGCCTACGG TGCACGGCAG
GTCACCACCA TCTTCGCCCC CGACAATCAG TATAAGGTGA TTCTGGAACT GGAGCCCCAA
TATCAGACCG ATCCTACAGC CCTCTCCATG CTCTACATCC GCTCCCAGAA GGGGGATCTG
GTCCCCCTGA ATACGCTGGC AAACCTGCGG CGCACCCTCG GCCCCCTGTC GGTGAACCAT
CTGGGGCAGA TCCCGGCGGT GACCATCTCC TTCAACCTGC GGCCCGACAC CCCCCTGAGC
GAGGCGGTGT CAGCCATCGA AAAGGTGAGC CGCGAGACGC TTCCCGCCAC CTTCACCACA
AGCTTCCAGG GGGTTGCCCA GGCCTATCAG CAGTCAACCA CGGGGCTCAC GGTTCTGATT
ATCATGGCGA TTGTTGTTAT CTACATCGTT CTCGGCATCC TCTACGAGAG CTACATCCAT
CCGATCACCA TCCTGTCGGG ATTGCCTTCA GCCGGTTTCG GGGCGCTGAT CACCCTCATG
ATTTTCGGCA AGGAGCTGAA CCTCTATGGT TTCGTGGGCC TTATCATGCT GATCGGCATC
GTCAAGAAGA ACGCCATCAT GATGATCGAC TTCGCGCTGG AGGCCCAGCG CAGTGAAGGG
ATGCCCCCCC TGGAGGCGAT CCACCAAGGC GCCCTTGTCC GTTTTCGTCC CATTATGATG
ACCACCATGG CGGCTCTCAT GGGAACCCTT CCCATTGCCC TCGGCATCGG GGCAGGGGCC
GAGGCCCGGC GCACCCTCGG GCTTTCAGTC GTGGGGGGGC TTGTCGTGTC GCAGCTGCTG
ACCCTCTACA TCACGCCGGT CATCTACTAC TATATGGATC GCATGCAGGA GTGGGTAAAG
ACGCGTTTCG GGATCGGGCA GAGTTCCCGA AAGGAGCGAC AGTCGGCAGG GTAG
|
|---|
| Protein sequence | MSIAEVFIRR PVMTSLVMLA VMLFGLLAYS KLPVNDLPTV DYPTIQVSAS LPGANPDTMA
ASVALPLERE FSTIAGVDSM NSTNGLGTSR ITIKFTLERD IDAAAQDVQA AISRAQRQLP
QDMPAPPSFQ KVNPADQAVL YLALSSPTLP LSTVNDYAEA MIAQRISMVN GVASVQVNGS
QKYAVRVQVD PKALAARKIG IDEVAQALER GNVNLPTGTL QGKHEALTIQ TSGQLYSAKE
YEPLIVAYRN GSPVRLGEIG KVIDSVENDK VAGWYKQTRA IILAIQRQPG TNTIEVVNRI
KELIPHFRSQ LPASVDLNIL FDRTGGIKES VADVKFTMML TICLVILVIF LFLRNLPATL
IPSLALPLSI VGAFSAMYLM GFSVNNITLM ALTLSVGFVV DDAIVMLENI VRHLEKGEDP
REASLRGSRE IGFTIVSMTI SLVAVFIPVL FMQGMLGRLL HEFAVTISLA ILISGFVSLS
LTPMLCSRFL RPHGEQRHGR FYNFMERFFN GMYRFYEVTL ARVLRLRRTV LAGTLVLTLL
TIWLFTKVPT GLLPSDDIGA IFAMTEGAQG ISFEEMKAKQ QQLAAIVLQD PNVEAFMSTA
GASGSRVSSN SGFMFIRLKP RQERKLNADQ VIQQLRPKVM GVPGIVMFLQ NPPPIRLEAR
LAKSQYQFVL QSPDTEDLYA RAAELEAKLK QVPLLLDVTS DLQLQNPQVQ LDIDRDKASA
LGVTAHQVED ALYYAYGARQ VTTIFAPDNQ YKVILELEPQ YQTDPTALSM LYIRSQKGDL
VPLNTLANLR RTLGPLSVNH LGQIPAVTIS FNLRPDTPLS EAVSAIEKVS RETLPATFTT
SFQGVAQAYQ QSTTGLTVLI IMAIVVIYIV LGILYESYIH PITILSGLPS AGFGALITLM
IFGKELNLYG FVGLIMLIGI VKKNAIMMID FALEAQRSEG MPPLEAIHQG ALVRFRPIMM
TTMAALMGTL PIALGIGAGA EARRTLGLSV VGGLVVSQLL TLYITPVIYY YMDRMQEWVK
TRFGIGQSSR KERQSAG
|
|---|
| |