Gene Gmet_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1645 
Symbol 
ID3740414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1846748 
End bp1848013 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content59% 
IMG OID637778929 
ProductAtz/Trz family chlorohydrolase 
Protein accessionYP_384601 
Protein GI78222854 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTT ACGCCGCTTC ATACATTCTG CCGATAGCAT CTCCCCCCAT CCCCGGCGGC 
GCGGTGGCTG TCCACGACGG CTGCATTGTC GAAACGGGAA CGCTGGCCGA GCTCCGTTCG
CGCCATAGCG GTCCCGTCCA TGATTTCCCC GGTTGCGCCA TCCTCCCCGG GCTCGTCAAC
GCCCACACCC ACCTGGAGCT TACCCATTTC CCTTCCTGGA AGATCCGCAA GGGGATTGAC
TATTCTCCTC GAACATACGT GGACTGGATA ATCCAGGTAA TCAAGATCCG GCGGGCCTTG
TCGCCACAGG AACTGGAGCT TTCCGTGCGC GAGGGGCTGC GGATTTGCCT CGAAGCCGGG
ACTACAGCCA TCGGCGAAAT CCTCACCGAC CGTTCACTTA TCCCCCTCTA TGCCGATTCA
GGCCTGAGAG GGAGGCTCTT ATTCGAGGCC ATCGGTCACG ACCCGGTTCG CAATGCCCAA
CTCGTCGAAG AACTTGATGC TGCCATCGCT TCCTTTTCCG GAGGCTCATT TCTCCCGGGC
ATTTCACCCC ATGCTCCCCA CACCGTTGCC GAACACCTAC ACCAGGATGT GTACCGTCTG
GCGTATGAGC GGAACGTGCC ACGAGTCATC CACCTGGCCG AGTCCCGCGA AGAGAGCGAT
TTTTTCTTTG ATTCTTCCGG AAAAATTGCC GAGTTTCTCT ATCCCCATGT CCGGTGGGAA
TCGTACCTCC CCGCACCACG GCGCACAACC GCTACAGCCT GGCTCGATGG GCTCGGCGTA
TTGAACGGCA CCATCTCGGC TGTTCACTGC GTTCACCTTA CGCCGTCCGA CGCCGAAATC
CTGGCCAAAC GTGGCGTCGG CGTGGTCCTC TGTCCCCGGA GCAACGACAA ACTCGCCGTG
GGGCGCGCCC CGGTCGTTCT GCTGAAGAGG CTCGGCGTCC CGCTTGCGCT TGGCACCGAT
TCACTGGCCA GCAATGACTC ACTCTCACTG TGGGATGAAA TGCGATATCT CCTTGATACC
TTCCCGGGCA TTTTTACTCC TACGGAAGCC CTTTCAATGA CCACCATCGG CTCTGCTCGC
CAGTTAGCCC TTGCTGATCG GACCGGTTCC CTCGATAAAG GGAAACATGC CGATTTCCTT
GTGATGAAGC TCCCGGGCCG GAATGGTTCC GGTGAGGCGC TGCATGAGGC GCTCATTCAT
TCGGGAGAGA TTCTTCAGGT TTTCCTTGCC GGCAATCTCG TTGTTAGCCG GGAGGCGTTT
TCTTGA
 
Protein sequence
MELYAASYIL PIASPPIPGG AVAVHDGCIV ETGTLAELRS RHSGPVHDFP GCAILPGLVN 
AHTHLELTHF PSWKIRKGID YSPRTYVDWI IQVIKIRRAL SPQELELSVR EGLRICLEAG
TTAIGEILTD RSLIPLYADS GLRGRLLFEA IGHDPVRNAQ LVEELDAAIA SFSGGSFLPG
ISPHAPHTVA EHLHQDVYRL AYERNVPRVI HLAESREESD FFFDSSGKIA EFLYPHVRWE
SYLPAPRRTT ATAWLDGLGV LNGTISAVHC VHLTPSDAEI LAKRGVGVVL CPRSNDKLAV
GRAPVVLLKR LGVPLALGTD SLASNDSLSL WDEMRYLLDT FPGIFTPTEA LSMTTIGSAR
QLALADRTGS LDKGKHADFL VMKLPGRNGS GEALHEALIH SGEILQVFLA GNLVVSREAF
S