| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1637 |
|---|
| Symbol | |
|---|
| ID | 3740406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1835829 |
|---|
| End bp | 1838087 |
|---|
| Gene Length | 2259 bp |
|---|
| Protein Length | 752 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637778921 |
|---|
| Product | malic enzyme |
|---|
| Protein accession | YP_384593 |
|---|
| Protein GI | 78222846 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
|---|
| TIGRFAM ID | [TIGR00651] phosphate acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000270094 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA AACAGGATGC CCTGGAATAC CATTCGAGCG GACGCAAAGG AAAGATAGAA
GTCGTCGCCT CGAAGCCTTG CCTTACCCAG CGGGACCTCT CTCTTGCCTA CTCCCCGGGC
GTTGCCGAAC CGTGCCTGGA AATCGAGAAA AACCCTGAGG ATGCTTATAA GTACACCGCG
AAAGGAAACC TGGTCGCCGT AGTCTCCAAC GGCACCGCGG TCCTGGGGCT CGGGAACATC
GGCGCCCTTG CCGGCAAACC GGTCATGGAA GGGAAAGGCG TCCTCTTCAA GCGCTTTGCC
GACATCGACG TCTTTGACAT CGAACTGAAC ACCGAGAACC CCGATGAGGT GATCAAAGCC
TGCCAACTCC TCGAGCCCAC GTTCGGCGGC ATCAACCTGG AGGATATCAA GGCCCCCGAG
TGCTTCTATA TCGAGGAAGA GCTCAAGAAG ACCATGAACA TCCCGGTCTT CCACGACGAC
CAACACGGCA CCGCCATCAT CTCCGCCGCC GCCCTCACCA ATGCGCTGGA GATCATCGAC
AAGAAGATCG AGGATATTCG CATCGTGGTG AACGGGGCCG GGGCCTCGGC CATCGCCTGC
GCCAACCTCG CCATCTCGTT GGGGGTGAAG AAGGAAAACC TCGTCATGTG CGATACCAAG
GGTGTCATCT ACAAGGGACG CACCGAGGGG ATGAACAAGT ATAAGGAACG CTTCGCCGTG
GACACCCCTC TGCGCACCCT GGAAGAGGCC GCGACAGGGG CCGACGTCCT CTACGGCCTC
TCCTCCAAGG GGGCATTCAC GCCGGAGATT GTGCGCAAGC TGGCCAAGAA TCCCATTATC
TTCGCCATGG CCAACCCGGA CCCGGAAATA TCGCCGGAAG AGGCCCATGC CGTGCGGGGC
GATGTCCTCA TCGCCACCGG CCGTTCCGAT TATCCGAACC AGGTGAACAA CGTCCTCGGC
TTCCCCTTCA TCTTCCGGGG AGCCCTCGAT GTCCGGGCCA CTACCATTAA CGAGGAGATG
AAGAAGGCTG CTGTTTTCGC CCTTGCCGAG CTTGCCCGTG AGGAATGCCC CGACTCGGTC
TGCCGCGCTT ACGGCAACGT GAAGTTTTCC TTTGGCCGCG ACTACATCAT TCCGAAACCC
TTTGACCCCC GTGCCCTCCT GCGGGTGGCA CCGGCAGTTG CCAAAGCGGC CATGGAATCG
GGGGTGGCCC GCCAGCCCAT CGAGGATATG GAGAAGTACG TTGAGCATCT TGAGTCGTTG
CAGGGTAAAG CAAAGGAAGC CCTGCGGATG ATCATTAACA AGGCCAAAGC CGATCCCAGG
AAGCTCGTCT TCCCCGAGGG AGATAACGAA AAAATCCTCA GGGCGACTCA GATTCTCATT
GAAGAAGAGA TTGCCAAACC GATCCTCATC GGCAACCAGG ACAAGATCCG GGAAAAGATG
GCGGAACTGG GACTCGACTT CAACGGCAGT GTCCAGATCA TTGACCCGGC CACCTTTGAG
CGTTCCGAAG AATATGCCCA GGAACTCTTC AGCCTGCGGC AGCGCAAGGG ACTGACCCTC
ACTGAAGCAC GCCGGATCAT GACCCGCAAA TCCCGCACCC ATTTCGGCTG TATGATGGTA
CACATGGGGG ATGCGGACTG CCTCCTCTCC GGCATCGACA CCCATTACCC CGAGACCATC
CGTCCGGCCC TTGAGGTCAT CGGCAGACAG CCGGGTCTGT CCAGCGTGCA CGGTCTCTAC
ATGATGGTCT TCAAGAAGGG GATTTATTTC ATGGCCGATA CCACGGTCTG CATCGAGCCG
ACTCCGGAAG AACTGGCGGA AACCGCCATT CTTGCGGCGG AAAAAGTCCG CATGCTCGAC
ATCGAGCCGA CAATCGCCAT GCTCTCCTTC TCCAACTTCG GCTCCGTCAA CCATCCCCAG
GCCCAGAAGG TCAGGCGTGC CGTCGAGATC GTCAAACAAA AGGCTCCCGA TCTTATCGTC
GACGGTGAAA TGCAGTCGGA CACCGCAGTC GTCTCGGAGA TGCTGCAGAA GAGCTTCTCC
TTTGCCTCCC TCAAGGAGGC GGCCAACGTC CTGATTTTCC CCGACCTGAA CTCCGGAAAC
ATCTGCTACA AACTCCTCCA CCATCTAGGC GGGGCTGAAG CGATCGGTCC GATTCTTATG
GGAATGCAGA AACCGGTTCA CGTCCTCCAG CGGGGTGACG ATGTGAGCGA CATCGTGAAC
ATGGCGGCGC TTGCAGTGGT GGATGCCCAG AATTCGTAA
|
|---|
| Protein sequence | MSKKQDALEY HSSGRKGKIE VVASKPCLTQ RDLSLAYSPG VAEPCLEIEK NPEDAYKYTA
KGNLVAVVSN GTAVLGLGNI GALAGKPVME GKGVLFKRFA DIDVFDIELN TENPDEVIKA
CQLLEPTFGG INLEDIKAPE CFYIEEELKK TMNIPVFHDD QHGTAIISAA ALTNALEIID
KKIEDIRIVV NGAGASAIAC ANLAISLGVK KENLVMCDTK GVIYKGRTEG MNKYKERFAV
DTPLRTLEEA ATGADVLYGL SSKGAFTPEI VRKLAKNPII FAMANPDPEI SPEEAHAVRG
DVLIATGRSD YPNQVNNVLG FPFIFRGALD VRATTINEEM KKAAVFALAE LAREECPDSV
CRAYGNVKFS FGRDYIIPKP FDPRALLRVA PAVAKAAMES GVARQPIEDM EKYVEHLESL
QGKAKEALRM IINKAKADPR KLVFPEGDNE KILRATQILI EEEIAKPILI GNQDKIREKM
AELGLDFNGS VQIIDPATFE RSEEYAQELF SLRQRKGLTL TEARRIMTRK SRTHFGCMMV
HMGDADCLLS GIDTHYPETI RPALEVIGRQ PGLSSVHGLY MMVFKKGIYF MADTTVCIEP
TPEELAETAI LAAEKVRMLD IEPTIAMLSF SNFGSVNHPQ AQKVRRAVEI VKQKAPDLIV
DGEMQSDTAV VSEMLQKSFS FASLKEAANV LIFPDLNSGN ICYKLLHHLG GAEAIGPILM
GMQKPVHVLQ RGDDVSDIVN MAALAVVDAQ NS
|
|---|
| |