Gene Gmet_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1600 
Symbol 
ID3741616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1801106 
End bp1802032 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content57% 
IMG OID637778885 
Product[Acyl-carrier-protein] S-malonyltransferase 
Protein accessionYP_384557 
Protein GI78222810 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.308396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.651021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGAC GAGCATTCAT ATTCCCCGGC CAGGGTTCGC AATATCCCGG CATGGGAAAG 
GATCTTGCGG ATAACTTCGC ACTAGCCCGG AAGACATTCG AGGAGGCTGA TGACGCCCTT
GGGGACAACT TGTCTCGCCT CTGTTTCGAT GGTCCCGAAG ACCAATTGAA GCTCACCGCC
AACACGCAGC CCTCTATCCT CACCGTTAGT GTGGCTGCCC TGCGGGTCCT TCAAGAGGAG
ACCGGCTTGA GTGCACAGTA TTTTGCCGGT CACTCTCTTG GAGAGTATTC CGCATTGGTG
GCTGCCGGCG TCATTCAGTT CGCAGACGCG GTTAGAACGG TTCGTGCTCG CGGGACCTTT
ATGCAGGAGG CTGTGCCTGT CGGCGTTGGA GCCATGGCAG CCATGTTGAG TATCGAGCCC
GACGTCCTTG CCGCTATCTG CGCTGAGGCT GCCCAAGGCG AAGAGGTCTC CCCTGCCAAC
TTCAATTCGC CTGGACAGAT TGTCATTGCA GGCCACACGG GGGCCGTCAA TCGGGCCATA
GAGATTGCCA AAGCCAAGGG GTTCCGCAAA GCGATGCTCC TTCCTGTAAG TGCCCCCTTC
CATTCGAGCC TCATGGTGCC TGCCGGTGAA AGGCTTGCCG GCGTCCTTGC CCCAATTACT
GTTGGTGCAT TCAGTGCGCC CGTGGTGACG AACGTGGAGG CTAAACCCAA TGACGACAAA
GCACGGGTGA AAGAGCTTCT TGTTCGTCAG GTGAGTGCTC CGGTTCTCTG GGATGCATCG
GTACGCGAAA TGGTGGCTCT TGGTGTTACG GAGTTCGTGG AGGTTGGCCC GGGCAAGGTT
CTGTCGGGTC TGGTCAAGAG GATTGACAAA GGAGTGTCCA CGAAGAATGT TGAAGACGCG
GCAGGAATTA AGGCCATCGG GGAGTAG
 
Protein sequence
MSRRAFIFPG QGSQYPGMGK DLADNFALAR KTFEEADDAL GDNLSRLCFD GPEDQLKLTA 
NTQPSILTVS VAALRVLQEE TGLSAQYFAG HSLGEYSALV AAGVIQFADA VRTVRARGTF
MQEAVPVGVG AMAAMLSIEP DVLAAICAEA AQGEEVSPAN FNSPGQIVIA GHTGAVNRAI
EIAKAKGFRK AMLLPVSAPF HSSLMVPAGE RLAGVLAPIT VGAFSAPVVT NVEAKPNDDK
ARVKELLVRQ VSAPVLWDAS VREMVALGVT EFVEVGPGKV LSGLVKRIDK GVSTKNVEDA
AGIKAIGE