| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1589 |
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| Symbol | |
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| ID | 3740570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1790972 |
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| End bp | 1791886 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637778874 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_384546 |
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| Protein GI | 78222799 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000000648729 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0689422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGGTT TCATTGTTAT CGACAAGCCG GCCGGCTTGA CTTCCCACGA CATCATTGCG
CGCGTCAGAC GGATTCTCGG CCAGAAGAAG GCGGGCCATA CGGGAACCCT TGATCCCTTT
GCCACCGGAG TTTTGCCGGT TGCAATGGGA GAGGGGACCA AGGCGATACC GTTTCTTGAT
GAGGCTGTGA AAGAGTACCG TGCAACCATG GTGCTCGGTG CTGCCACCGA TACCCAGGAC
TGTACCGGCA GGGTCGAGAA AGAAGGGGAC TGGACTCGAT TGTCCGTTGA GGCGGTCAGG
GAAGTTTTCG GTGCATATAT CGGAAAGTGC AAGCAGATCC CTCCCATGTA CTCTGCGGTC
AAGCAAGGGG GGGTTCCCCT CTACCGACTA GCGCGAAAAG GGCATGAGGT GGAACGAGAA
CCCCGGGATA TCGAGATCCA TTCCCTCATA ATCGATCGTA TGGAGCTGCC GCGAATTGAG
TTTACGGTTT CCTGCTCCCG GGGCACCTAT GTGAGAACGC TGGCACACGA CATGGGGGAG
CGCCTCGGTT GCGGCGCCCA TCTTTCTGCG CTGCGCAGAA CGCGGAGCGG CCCGTTTGAC
CTTTCCCGGG CCGTGACCCT TGACGAACTG GCAAGCATCA AGGAACAAGG CGCTGTTGAT
TCGCTTCTGC TGGCTCCCAA CGAGGTGCTT GGTCATTTTC CCGAGATCGA GCTCTCAGAC
GAGGAAGTCC GCAAGGTTTA CTGCGGAGTC CCTCCCCGTT GCCATGGCAG ATGCGAAGAA
TCTTCAGCGT CGCAAAATGA CGGTAAGAAG GTGCGTCTCG TTCAGAATGG CAAGCTTCTC
GCTGTGGCTG AAATCGGTCA GGCTGAATCG GGTAACGGGA ACAAAAGCCT AAGGCTTATA
AGGGTTTTTA ACTAG
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| Protein sequence | MDGFIVIDKP AGLTSHDIIA RVRRILGQKK AGHTGTLDPF ATGVLPVAMG EGTKAIPFLD
EAVKEYRATM VLGAATDTQD CTGRVEKEGD WTRLSVEAVR EVFGAYIGKC KQIPPMYSAV
KQGGVPLYRL ARKGHEVERE PRDIEIHSLI IDRMELPRIE FTVSCSRGTY VRTLAHDMGE
RLGCGAHLSA LRRTRSGPFD LSRAVTLDEL ASIKEQGAVD SLLLAPNEVL GHFPEIELSD
EEVRKVYCGV PPRCHGRCEE SSASQNDGKK VRLVQNGKLL AVAEIGQAES GNGNKSLRLI
RVFN
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