| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1547 |
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| Symbol | |
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| ID | 3739016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1751396 |
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| End bp | 1754533 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637778833 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_384506 |
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| Protein GI | 78222759 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00394954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.706432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGAGA AAATCATCGA CTACTCCGCG AGAAATCGCA TCATTATCAT CATGATCTTC
GCCCTGATTG TGGCTGCGGG GGTATGGGCG GTCTACAGGA CGCCGGTTGA CGCCATTCCC
GACCTCTCCG ACAACCAGGT GATCGTCTTC ACCGAATATC CGGGACGCTC GCCGCAGGTG
GTGGAGGACC AGGTGACCTA TCCCCTGGCC GTAAACCTCC AGGGGCTGCC CCAGGTGCGC
GCCGTCCGGG CGTCGAGCGC CTTCGGCTTC TCCATGATCT ATGTCATCTT CGAGGACAAG
GCCGACATCT ACTGGGCCAG AACTCGGGTG CTGGAGCGCC TCAACTACGC TGCATCGCTC
CTGCCGCCCA ACGTCCGCCC GACGCTTGGC CCCGACGGCA CCGGCGTCGG CCATGTCTTC
TGGTACACCC TGGAAGGAAA AGGATATGAC CTGGAACAAC TCCGGACGCT CCAGGACTGG
TTTGTCCGCT ACCAGCTGAA CACCGTCCCC GGCGTGGCCG AGGTGGCCTC CATCGGCGGA
TACGTCCGCG AATACCAAAT CGACCTGGAT CCCAACCGGC TCTTCGCTTA CAACGTCAAG
GTTGATCAGG TTATGGAGGC GGTGAAGCGC TCCAACAACG ACGTGGGCGG CAGGCTCATG
GAACAGGCCG ACGCCGAGTA CCTGATCCGC GGCAAGGGGT ACATCAAGTC TCCCAAGGAC
CTGGAGGACA TCGTGGTCGG CGCCGACATG CGCGGCACGC CGGTCTACGT CAAGAACCTC
GGCACCGTGC AACTGGGGGG CGCCATCCGT CGGGGGCTCC TCGACATGAA CGGCGAAGGG
GAGGCGGTGG GCGGCATCGT GGTCATGCGC TACGGCGAGA ACGCCAAGGA CGTCATCGAC
CGGGTGAAGG AGAAGATCAA GTCTCTGGAG CAAGGGCTTC CCCCCGGCGT AAAGATTATG
GTCTCCTACG ACCGCTCCGA TTTGATCATG CGGGCCATTG ACACCCTGAA ACACTCGCTG
CTGGAAGAAT CGGTGGTGGT ATCCCTGGTG ATCCTCGCCT TCCTCCTCCA CTTCCAGAGC
TCCCTGGTGA TCGTGCTGAC CCTCCCAATT GCGGTGCTGA TCTCGTTCAT CACCATGAAG
CTCATGGGGG TCACCTCCAA CATCATGTCC CTGGGGGGGA TCGCCATTGC CATCGGCGTG
CTGGTGGACG CCGGGGTCAT CATGGTGGAA AACTGCTACC GGCACCTCTC CGAGCTCCCC
CCCGAGGAGC GCAAAGAGAA GCGGCTGGAG GTGATCATCA CAAGCGCCAA GCAGGTGGGA
CGAGCGATCT TTTTCTCCCT GGCCATCATC GTCCTCTCCT TCGTGCCGGT CTTCCTCCTG
GAGGGGCAGG AAGGGAAGAT GTTCCACCCC CTCGCCTTCA CCAAGACTTT CTCCATGGTG
GGATCGGCCT TCATCGCCAT CACGCTCGTG CCGGTCCTCA TGTTCTTCTT CATGCGGGGG
AAGATGCCGC CTGAGAGCTC CAACCCGGTT TCCATGTTCT TCATCCGGCT CTACTCGCCG
GTGATCCGCT GGGTACTGAA GTGGAAAAAG ACCACCATCG CCCTTAACCT CGTGGCCCTG
GCCATCGCCA TCCCGATGTT CATGACCCTC GGCTCCGAGT TCATGCCCCC TCTTGACGAG
GGATCGCTCC TCTACATGCC GGTGACGCTC CCCAACATCT CCATAACCGA GGCGAAGCGG
CTTATCCAGG TGCAGGACAC AGTCATCAAG AGCGTCCCCG AGGTGGAGCA CGTCCTCGGC
AAGGTGGGGC GCGCCGAAAC CTCCACCGAC CCGGCGCCGG TCTCCATGTT CGAGTCGATC
ATCATCCTGA AACCCAAGGA GAAGTGGCGG GCCGGGGTCA CCAAGGCCGA CATCGTCTCG
GAGCTGGATG CCAAGCTCCA GCAGATCGGC GTCAGAAACG GCTGGACCCA GCCGATCATC
AACCGGATCA ACATGCTCTC CACCGGGGTC AGGACCGACC TGGGGGTCAA GATCTTCGGC
AACGACCTGA ACGTCCTCAA GGACCTGGCG GTCCAGGCCG AGGGGATTCT GAAGACCGTT
CCCGGCGCTG CCGACGTGGT GGCCGAGCGG GTCACCGGCG GCAACTACAT CGACATCGAC
ATCGACCGGG AGGCCGCGGC CCGCTATGGG GTGAACGTGG GCGAAATCCA GGATGTCATC
GAGACCGCCC TGGGGGGCGA GATGCTCTCC ACCTCGGTGG AGGGGCGCAA CCGCTTCCCG
ATCCGCATCC GCTATATGCG CGACTATCGT GACAATATCC CGGCCATCCA GCGCATCCTC
GTGGGCGGCA TGGAGGGGGC TCAGGTGCCG CTGTCGCTCG TGACGAAGCT CAAGGTCTCC
ACCGGTGCGC CGGAGATCAA CAGCGAGGGA GGGCTGCTGC GCTCCATCGT CTTCCTCAAC
GTGCGTGGCC GCGACATGGG GGGCTTTGTG GGTGAGGCAA AGACCGTCCT CGAAAAGAAC
CTGAAGCTCC CGGCGGGTTA CTACGTGGCA TGGTCGGGAC AGTGGGAGAA CCAGGTCCGG
GCCAAGCAGC GCCTCCAGAT CCTGGTGCCG GCGGGGATGC TCATCATCTT CATTCTCCTC
TACTTCACCT TCCACTCGGC CCTGGAGGCG AGCATGGTCA TGCTCTCGGT CCCCTTCGCC
CTGGTGGGGG GGGTCTACCT GGTGAAGGCC CTCGGCTACA ACATGTCGGT GGCAGTCTGG
GTCGGCTTCA TCGCCCTCTA CGGCATCGCC GTGGAGACTG GGGTGGTGAT GGTCATCTAC
CTCCATGAGG CCTTGGACAA GAAGCTCATC AACGGGCCAT GCACCGAGCA GGACATCTAT
GATGCCACCT TCGAGGGGGC GGTGCTGCGG CTGCGCCCCA AGCTCATGAC CGTGGCAGTG
GCCCTCATCG GCCTGATACC GATCATGTGG TCCAGCGGTA CCGGCGCCGA CGTCATGAAA
CCGATCGCGG CCCCCATGAT CGGGGGGATG ATCTCCTCGG CCATCCATGT CCTCATCATG
ACGCCGGTCA TCTTTGTGTT GATGAAAAAA CATGATCTAA AAAAGGGTAA ACTGAAGTAT
TCAGGGATGA AGCATTAG
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| Protein sequence | MIEKIIDYSA RNRIIIIMIF ALIVAAGVWA VYRTPVDAIP DLSDNQVIVF TEYPGRSPQV
VEDQVTYPLA VNLQGLPQVR AVRASSAFGF SMIYVIFEDK ADIYWARTRV LERLNYAASL
LPPNVRPTLG PDGTGVGHVF WYTLEGKGYD LEQLRTLQDW FVRYQLNTVP GVAEVASIGG
YVREYQIDLD PNRLFAYNVK VDQVMEAVKR SNNDVGGRLM EQADAEYLIR GKGYIKSPKD
LEDIVVGADM RGTPVYVKNL GTVQLGGAIR RGLLDMNGEG EAVGGIVVMR YGENAKDVID
RVKEKIKSLE QGLPPGVKIM VSYDRSDLIM RAIDTLKHSL LEESVVVSLV ILAFLLHFQS
SLVIVLTLPI AVLISFITMK LMGVTSNIMS LGGIAIAIGV LVDAGVIMVE NCYRHLSELP
PEERKEKRLE VIITSAKQVG RAIFFSLAII VLSFVPVFLL EGQEGKMFHP LAFTKTFSMV
GSAFIAITLV PVLMFFFMRG KMPPESSNPV SMFFIRLYSP VIRWVLKWKK TTIALNLVAL
AIAIPMFMTL GSEFMPPLDE GSLLYMPVTL PNISITEAKR LIQVQDTVIK SVPEVEHVLG
KVGRAETSTD PAPVSMFESI IILKPKEKWR AGVTKADIVS ELDAKLQQIG VRNGWTQPII
NRINMLSTGV RTDLGVKIFG NDLNVLKDLA VQAEGILKTV PGAADVVAER VTGGNYIDID
IDREAAARYG VNVGEIQDVI ETALGGEMLS TSVEGRNRFP IRIRYMRDYR DNIPAIQRIL
VGGMEGAQVP LSLVTKLKVS TGAPEINSEG GLLRSIVFLN VRGRDMGGFV GEAKTVLEKN
LKLPAGYYVA WSGQWENQVR AKQRLQILVP AGMLIIFILL YFTFHSALEA SMVMLSVPFA
LVGGVYLVKA LGYNMSVAVW VGFIALYGIA VETGVVMVIY LHEALDKKLI NGPCTEQDIY
DATFEGAVLR LRPKLMTVAV ALIGLIPIMW SSGTGADVMK PIAAPMIGGM ISSAIHVLIM
TPVIFVLMKK HDLKKGKLKY SGMKH
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