Gene Gmet_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1486 
Symbol 
ID3740203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1679853 
End bp1680845 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content62% 
IMG OID637778772 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_384445 
Protein GI78222698 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.608224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAT TGGTCACCGG CGGTGCCGGC TACATAGGAA GTCACGTGGT GAAGGCCCTT 
GGCCTGGAGG GGCATGAGCT GCTCGTGTAC GACAACCTCT CCACGGGGCA CGAGTGGGCG
GTCATGTACG GCACTCTCGT CAAGGGAGAT CTGGAGGACC GGGCTCTGCT GGAAAAGGTC
TTCCGCGAGT TCCGTCCCGA CGCGGTGATG CACTTTGCCG CATCCATCCA GGTGGAGGAA
TCGGTTCGCC GGCCGCTTCT CTACTACGGC AACAACACGG CCGGCACCCT GAATCTCCTC
GATGTAATGG TCAGGACGGG GGTGCGATGC CTGGTGCATT CCTCCACTGC GGCGGTCTAC
GGGATTCCGG ATGTGGTGCC GGTCGCCGAA ACCGCTCCCC TTGCTCCCAT CAACCCCTAC
GGCTCATCAA AGGCCATGGT GGAAAAAATT CTTGCCGACC TTGCACTGGC CGAGGATTTC
CGCTACGTGG CCATCCGCTA CTTCAATGTG GCCGGCGCCG ATGTGGCGTG CCGCCTGGGC
CAGGCCTACC GTGAGGCGAC TCACCTCATC ACCCGGGCGC TCAAGACCGC CCACGGCCAG
TACGAACGGC TCCAGATCTT CGGGACCGAC TACCAGACTC CCGACGGCAC CTGTATCCGT
GATTACATCC ACGTGGACGA CCTTGCCGCC GCCCATGTTC TGGCCCTGGA TTACCTGACT
GAGGGAGGCG CGAGCGAGAT CGTCAACTGC GGCTACGGGC ACGGATTTTC GGTGCGTGAG
GTGATCGAGG CCGTGGCGCA TGTTACCGGC ACCCCTTTTC CGGTAGAGGA AACGGGGCGG
CGGCCGGGTG ACCCGCCGGC CCTGGTCGCG GACAGCTCCA AACTCCGATC CCTCATGAAG
TGGGAGCCCC AATACGACAA TCTCGACTTC ATCATCAGGA CTGCCTGGGA ATGGGAGCTG
GCTCTCAAGC GGAGGGAGTC ATGTGCGGCA TAG
 
Protein sequence
MKILVTGGAG YIGSHVVKAL GLEGHELLVY DNLSTGHEWA VMYGTLVKGD LEDRALLEKV 
FREFRPDAVM HFAASIQVEE SVRRPLLYYG NNTAGTLNLL DVMVRTGVRC LVHSSTAAVY
GIPDVVPVAE TAPLAPINPY GSSKAMVEKI LADLALAEDF RYVAIRYFNV AGADVACRLG
QAYREATHLI TRALKTAHGQ YERLQIFGTD YQTPDGTCIR DYIHVDDLAA AHVLALDYLT
EGGASEIVNC GYGHGFSVRE VIEAVAHVTG TPFPVEETGR RPGDPPALVA DSSKLRSLMK
WEPQYDNLDF IIRTAWEWEL ALKRRESCAA