Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1417 |
Symbol | |
ID | 3738944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1586276 |
End bp | 1586551 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637778700 |
Product | histone-like DNA-binding protein |
Protein accession | YP_384376 |
Protein GI | 78222629 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00000053245 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.466182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAGG CAGATATTGT CGAGCAGATC TACGAGAAGG TGGGTTTTTC AAAAAAAGAA TCCGCTGAAC TTGTTGAGCG GGTCTTTGGT CTGATCAAAG AAACCCTTGA AAATGGTGAA AAGATAAAGA TCGCCGGTTT CGGTAACTTT GTCGTGAAGG AAAAAGCTGA CCGGCGTGGC CGCAATCCCC AGACAGGCGA TGAGATTATC ATTTCCGCCC GCAGGATTCT CACGTTCAAG CCCAGTCAGG TTCTCAAGTC CTCGATCAAT TCCTGA
|
Protein sequence | MTKADIVEQI YEKVGFSKKE SAELVERVFG LIKETLENGE KIKIAGFGNF VVKEKADRRG RNPQTGDEII ISARRILTFK PSQVLKSSIN S
|
| |