| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1411 |
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| Symbol | thrS |
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| ID | 3738938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1579409 |
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| End bp | 1581346 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637778694 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_384370 |
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| Protein GI | 78222623 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000074774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.343495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCTTC GTGTTAAGGG GGCAGCGATG GGTGACATCA AGGTTGCACT GCCGGATGGT
TCGGAAAGGG TTCTTGCCGA GGGGGCAACG GTGCGCGATC TGGCCGCCTC TATCGGCGCT
GGGCTTGCAA AGGCCGCCAT TGCCGGCAAA ATCAACGGTG TTGCCGTCGA TCTGACGGCG
CCTCTTGTGG ATGGCGTCAA GGTCGAGATC ATAACCGAGA AGTCCCCTGA GGCCCTGGAG
ATTATCCGCC ACTCCACCTC CCACCTCATG GCCCAGGCGG TCAAGGAGCT TTTCCCGCAG
GCGAAGGTCA CCATCGGACC CGCTGTCGAG AATGGTTTTT ATTACGACTT TGATGTCGAT
CATGCCTTTA CTCCCGAAGA CCTTGAAAAA ATAGAGACCC GAATGAGGGA GCTCGCCAAG
TCTGACCTTA AGCTGGAGCG TCAGGTTCTC TCTAAGGATG AGGCTATCAA GCTCTTCCGG
GATATGGGGG AGAACTACAA GGTCGAGTTG ATTGAGGCCA TTGGCGATAA TACTGTATCT
CTCTATCGTC AGGGGGATTT CGTCGATCTT TGTCGCGGCC CCCATCTCCC ATCAACGGCC
AACTGTCGTG CTTTCAAGCT TACTTCTCTT GCAGGCGCCT ACTGGCGCGG CGACGAGAAG
AATAAAATGC TCCAGCGGGT CTACGGAACC GCCTTTGCCG ACAAGAAGGA ACTCGATGCA
TATCTGGAGA GGATCGAAGA GGCCAAGCGC CGCGACCATC GCAAGCTGGG CAGGGAGCTC
GATCTTTTCT CGTTTTCCGA TGAGGTTGGG GCGGGGTTTG TAATCTGGCA TCCTAACGGA
GCCATGCTGC GGACCATTCT TGAAGATTTC GAGCGCAAGG AGCACCTGAA GCGCGGTTAC
GACATCGTTG TGGGGCCACA GATACTTAAG ACTGATCTTT GGCAGCGTTC AGGCCACTAC
GATAACTACC GCGAAAACAT GTATTTCACC GAAGTGGAGG AGCAGAGCTT CGGCATCAAG
CCGATGAACT GTCTCAGTCA CATGATGATA TACAAGTCGC ATCTGCGCAG TTATCGGGAT
CTGCCGCTCC GCTTCTTTGA ACTCGGCACC GTGCACCGCC ATGAGCGGGC CGGCGTCCTC
CACGGGCTTC TGCGTGTTCG TTGCTTTACT CAGGACGATG CCCATATCCT CTGTACCCCG
GAACAGCTCG ATGACGAGAT CAAGGGTGTC ATTTCCTTTG TCAACGATGT CATGGGTATT
TTCGGGTTCG AGTTCGAGAT GGAACTCTCC ACCCGGCCAG AAAAGTCCAT CGGTTCCGAT
GAGGATTGGG AGCGGGCTAC CAATGCGCTT CTCGGGGCGC TGAAGGATTC CGGACGTCCC
TACGAGATTA ATGAGGGGGA CGGTGCATTT TATGGGCCGA AGATCGATAT CAAACTGCGC
GATTCTCTTG ACAGAAGGTG GCAGTGTGCT ACAATCCAGT GCGATTTTAC GCTTCCTGAG
CGGTTTGATT TAACCTATGT CGACGCAGAT GGTGAAAGGA AGCGCCCTGT GATGGTTCAC
CGGGTGATTC TTGGTTCCAT CGAGCGCTTC ATAGGTGTTC TTATTGAACA TTTTGCTGGT
AATTTCCCCG TGTGGCTCTC GCCGGTTCAG GCAATCGTGA TGACCGTCAC GGACAATCAG
CAGTCCTATG CCGCCCAGGT TTTCGAGGCG CTTCGCTCGA GCGGGATTCG GGTGCGGAAG
GACTTCCGCA ACGAAAAACT CGGGTTCAAG ATCCGCGAAG CGCAGCTCCA GAAGATTCCG
TACATGCTCG TCATTGGCGA CAAGGAAGTG GAGTCCGGGA CGGTGACTCC GCGGTTCCGT
GATGGTTCGA ACCTCGCGGC CATGAAGCCC GAGGAGTTTG TTGTGTTCAT TAACGAAGAC
GTCAAGCGCT TCAAATAG
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| Protein sequence | MPLRVKGAAM GDIKVALPDG SERVLAEGAT VRDLAASIGA GLAKAAIAGK INGVAVDLTA
PLVDGVKVEI ITEKSPEALE IIRHSTSHLM AQAVKELFPQ AKVTIGPAVE NGFYYDFDVD
HAFTPEDLEK IETRMRELAK SDLKLERQVL SKDEAIKLFR DMGENYKVEL IEAIGDNTVS
LYRQGDFVDL CRGPHLPSTA NCRAFKLTSL AGAYWRGDEK NKMLQRVYGT AFADKKELDA
YLERIEEAKR RDHRKLGREL DLFSFSDEVG AGFVIWHPNG AMLRTILEDF ERKEHLKRGY
DIVVGPQILK TDLWQRSGHY DNYRENMYFT EVEEQSFGIK PMNCLSHMMI YKSHLRSYRD
LPLRFFELGT VHRHERAGVL HGLLRVRCFT QDDAHILCTP EQLDDEIKGV ISFVNDVMGI
FGFEFEMELS TRPEKSIGSD EDWERATNAL LGALKDSGRP YEINEGDGAF YGPKIDIKLR
DSLDRRWQCA TIQCDFTLPE RFDLTYVDAD GERKRPVMVH RVILGSIERF IGVLIEHFAG
NFPVWLSPVQ AIVMTVTDNQ QSYAAQVFEA LRSSGIRVRK DFRNEKLGFK IREAQLQKIP
YMLVIGDKEV ESGTVTPRFR DGSNLAAMKP EEFVVFINED VKRFK
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