| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1353 |
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| Symbol | ispG |
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| ID | 3738687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1514414 |
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| End bp | 1515481 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637778633 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_384312 |
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| Protein GI | 78222565 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000421147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000000000000142469 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATACGCG AAACCAGGCA GATTCACGTA GGAAATGTCG CCATCGGCGG GGGAGCCCCC
TGTTCGGTGC AGTCCATGTG CAACACCGAT ACCCGCGACG TGGCAGCCAC CCTTTCCCAG
GTTCTCTCCC TTTCATCGGC GGGTTGTGAG ATCGTCCGCT GCGCCGTGCC CGACATGGCG
GCGGCCGAAG CGCTGGGTGA GATCAAGCGG CAGAGCCCGA TCCCGGTCAT CGCCGACATC
CACTTCGATT ATCGCCTTGC CCTGCGGGTG CTCGAAGGGG GGATTGACGG CCTGCGCCTC
AACCCCGGCA ATATCGGCGA GCGGTGGAAG GTGGAAGAGG TGGTGAAGGC GGCCCGGGAG
CGCCTCGTCC CGATCCGGAT CGGTGTCAAT GCCGGTTCCC TGGAGAAGGA GCTCCTCGAA
AAGTACGGCC ATCCCACCGC CGAGGCCATG GTTGAGTCGG CCCTGGGCCA TGTCCGCATC
CTCGAGGATA TCGGCTACGA CCAGATCAAG ATCTCCCTCA AGGCCTCCGA CGTCATGAAG
ACCGTGGAAG CCTACCGGCT CCTGGCTCAG AAGGTCGATT ACCCTCTCCA CATCGGCATC
ACCGAAGCCG GCACCATCTT CTCCGGCACC ATCAAGTCCT CCGTGGGGCT CGGCATCCTC
CTGGCCGACG GCATCGGCGA CACCATGCGC GTATCGCTCA CCGGCGATCC CGTGGACGAA
GTGCGGGTCG GCTTCGAGAT TCTCAAGGCC CTGGGGTTGC GGCAGCGGGG AATCAATTTC
GTCTCCTGTC CCACCTGCGG CCGTTGCCAG ATCAATCTGA TCGGCGTCGC CCAGGAGGTG
GAGAACCGCC TCGCCGCCAT CGATACTCCT CTGACCGTGG CTGTCATGGG GTGTGTGGTG
AACGGTCCGG GCGAGGCGCG GGAGGCCGAT GTGGGGATCG CCGGAGGGAA GGGTGAAGGA
CTCCTTTTCC GGCATGGCGA GATCGTCCGC AAGGTCCCCG AAGCCGAGAT GGCCGATGCC
TTGATCGCCG AGGTGGAGCA AATGGCCAAG GAAAAAACAC ACTCATAG
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| Protein sequence | MIRETRQIHV GNVAIGGGAP CSVQSMCNTD TRDVAATLSQ VLSLSSAGCE IVRCAVPDMA
AAEALGEIKR QSPIPVIADI HFDYRLALRV LEGGIDGLRL NPGNIGERWK VEEVVKAARE
RLVPIRIGVN AGSLEKELLE KYGHPTAEAM VESALGHVRI LEDIGYDQIK ISLKASDVMK
TVEAYRLLAQ KVDYPLHIGI TEAGTIFSGT IKSSVGLGIL LADGIGDTMR VSLTGDPVDE
VRVGFEILKA LGLRQRGINF VSCPTCGRCQ INLIGVAQEV ENRLAAIDTP LTVAVMGCVV
NGPGEAREAD VGIAGGKGEG LLFRHGEIVR KVPEAEMADA LIAEVEQMAK EKTHS
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