Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1349 |
Symbol | |
ID | 3738489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1508874 |
End bp | 1511402 |
Gene Length | 2529 bp |
Protein Length | 842 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637778629 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_384308 |
Protein GI | 78222561 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.228837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00000000348515 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTCTTC CCATTGAAGA CATCCTGCCT CAGCTGACAT CCTCCCTTCA GACCCACAAT TCCGTGGTCA TCCAGGCTCC GCCCGGAGCC GGCAAGACGA CGCGTGTTCC CCTTGCACTC CTGGACGCCC CATGGCTCCG GGGGAAGGGG ATTGTCATGC TCGAGCCGCG ACGGCTCGCG GCCACCAATG CCGCCCGCTG GATGGCGTCC ATCCTTGGCG AGGAAGCGGG AGGGACGGTG GGCTACACGA TCCGCTTCGA CCGGAAGGTG TCGCGCCAAA CCCGGGTGGA GGTGGTTACC GAGGGAGTGC TCACTCGCCG GCTCCAGACA GACCCGCTCC TCGAGGGGGT TGGCGCGGTG ATCTTCGACG AGTTCCACGA GCGGAGCATC CATGCGGACC TGGCCCTGGC CCTCTGTCGC GACGTGCAGC AGGGATTGCG GGAGGAGCTG CGGATCATCG TCATGTCGGC GACCCTCGAA GCGGCGCCGG TGGCAGGGCT TCTGGGGGAC GCGCCGATCA TTACGAGCGA GGGGCGGAGT TTTTCCGTGG AGATCCGCCA CCTTCCCGAG GATTCCCGCG ACCCCCTCCC GATTGCCGTC TCCCGCGCCA TTCGCACGGC CCTTGCTGTC ACAGAGGGGG ACATCCTCGC CTTTCTGCCG GGAGTAGGGG AAATCCGGCG TTGTCACCAA TTCCTGCAGG AAGGGGAAGC GCTCCATTCT GCGCCTCTCA TTGCTCCCCT CTATGGCGAC CTCCCCTTTG CCGAACAGGA ACGGGCCATT CTTTCCGCCG ACCGGCGCAA GGTGGTGCTC GCCACCAATA TAGCGGAAAC GAGTCTCACC ATCGAAGGGG TGCGGGTGGT CATCGACAGC GGTTTTTGCC GCCGGCTGCG GTTCGATCCC GGGTCGGGGC TTGACCGGCT CGTCACGGAG CGGATTTCGG CCGCCTCCGC CACCCAGCGG GCAGGGCGGG CCGGCCGGCT CGGTCCTGGC ACCTGCTTCC GGCTCTGGTC CGAACACACT CAGCGGACCC TCATTCCCGC CGACCCTCCC GAGATCGCCA CCTCCGACCT GACACCGGTG GCCCTTGACC TGGCTGCCTG GGGGGTGACC GATGCCTCCA CCCTTTCGTG GCTCACGCCC CCTCCGAAAT CCTCTTTGGA GGAGGGGCGA CAGCTCCTTG TTCAGCTTGA AGCCCTCGAC CGCCACGGCA TGATCACCGA GGTTGGCCGA CGGATGGCGG AGCTGCCGGT CCATCCCCGC CTCGCCCACA TGCTTACCAG GGCCGTCGGG AGGGGCGTTG GTCCCCTTGC CTGTGACGTG GCGGCGATCA TGTCGGAGCG TGACCTCGTG AAGGCTTCCG GAGGGACGGC GTTGGAGCGG AGCGAAAGCG ACATGCTCGT TCGGGTTGAG GTGCTGAATG GGTGGCGGAA GGGGCGGCGC TTTGCAGGGG GGGATGCCGC GACCTGCCGC ACCGTCGACC GCTCTGCCCA GCATCTGCGC AGGTTGCTCA ACATCGGGAA GGAGCATGCG GTTGTCGGCG CGGATGCCGA AACGGTGGGC CTCCTGCTCG CCTGGGCCTA CCCGGATCGA ATCGCGCTGC GCCGCGGTGA CGGCGGGCGC CGGTATCTCC TTGCCGGAGG ACGCGGGGCG CTTCTCTCCG AACGAAGCTC GGTCCATGAC GAGCCGCTTC TGGTGGCCCA TGTGGTGGAG CGGGGGGAGA GGGGAGACGA CCTGATTCGC CAGGCAAGTG TTCTGACGCT GGAAACCTTC AGAAGGGAGT TCTCCGACGG CATCGTCACC GGGAGGAACG TGTTCTGGGA TGAGCGGGAA GGGAGGGTGG TAAGCTGCGA GGAGGAGCGG TTCGGTGCCC TCGTCCTCGG AAGCAGGCCA TCCGCTGCCA CGGCTGACGA GGTGCGAAGC GCACTGGTGG AGGGAATCGT GAGGGGGCCC GGCCTGTCAG CCCTTAGCTG GTCCACGGCC GCACGCCGGT TCAGGGCGCG GGTGCGGCTC ATGGCCCGCG TTTTTCCCGA CGAGGGATGG CCCAATCTCT CCGATGAGGC CCTCCTGGCA ACCCTTGGCG AGTGGCTGGG ACCTCAACTG GACGGGGTGC GGCGACTTGC CGACGCGGCT GCGGTGGACC TGCTCCCTCC CCTGCAGGGG CTCCTCCCCT GGAATCTGCT CCGCCGCCTC GATGAAGGGG CGCCGACCCA TCTGGTGGTT CCGAGCGGTT CGCGGGTCCC TATCGATTAC GGAGATGACG GGACACCGAC CCTGGCGGTG AAGCTCCAGG AGATGTTCGG CCTTGCCGAG ACCCCCACCG TGGCGTGGGG GAGGGTGCCG GTGGTTGTCC ATCTCTTGTC GCCGGCTGGC CGCCCCCTTC AGGTGACCGC AGACCTGCGG GGGTTCTGGA ACGGGGCCTA CCAGGAGGTG AAAAAGGAAA TGCGGGGACG CTACCCAAAG CACCCGTGGC CCGATGACCC GTGGACTGCC ATACCCACGC GCAGGACAAA GGGGCATGAG AGAAAATAG
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Protein sequence | MLLPIEDILP QLTSSLQTHN SVVIQAPPGA GKTTRVPLAL LDAPWLRGKG IVMLEPRRLA ATNAARWMAS ILGEEAGGTV GYTIRFDRKV SRQTRVEVVT EGVLTRRLQT DPLLEGVGAV IFDEFHERSI HADLALALCR DVQQGLREEL RIIVMSATLE AAPVAGLLGD APIITSEGRS FSVEIRHLPE DSRDPLPIAV SRAIRTALAV TEGDILAFLP GVGEIRRCHQ FLQEGEALHS APLIAPLYGD LPFAEQERAI LSADRRKVVL ATNIAETSLT IEGVRVVIDS GFCRRLRFDP GSGLDRLVTE RISAASATQR AGRAGRLGPG TCFRLWSEHT QRTLIPADPP EIATSDLTPV ALDLAAWGVT DASTLSWLTP PPKSSLEEGR QLLVQLEALD RHGMITEVGR RMAELPVHPR LAHMLTRAVG RGVGPLACDV AAIMSERDLV KASGGTALER SESDMLVRVE VLNGWRKGRR FAGGDAATCR TVDRSAQHLR RLLNIGKEHA VVGADAETVG LLLAWAYPDR IALRRGDGGR RYLLAGGRGA LLSERSSVHD EPLLVAHVVE RGERGDDLIR QASVLTLETF RREFSDGIVT GRNVFWDERE GRVVSCEEER FGALVLGSRP SAATADEVRS ALVEGIVRGP GLSALSWSTA ARRFRARVRL MARVFPDEGW PNLSDEALLA TLGEWLGPQL DGVRRLADAA AVDLLPPLQG LLPWNLLRRL DEGAPTHLVV PSGSRVPIDY GDDGTPTLAV KLQEMFGLAE TPTVAWGRVP VVVHLLSPAG RPLQVTADLR GFWNGAYQEV KKEMRGRYPK HPWPDDPWTA IPTRRTKGHE RK
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