Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1345 |
Symbol | |
ID | 3738485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 1503856 |
End bp | 1505562 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637778625 |
Product | polysaccharide biosynthesis/export domain-containing protein |
Protein accession | YP_384304 |
Protein GI | 78222557 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000291611 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCCTGA GCGGGGACCG GAGCCGTGAT ATCCGCCTGG AAAACGGCGA CACAGTCTTC GTGCCGGTCA TCGGGCCGGT GGTTGCCGTG GCGGGGGAGG TCAAGCGGCC CGGCATTTAT GAGGTCAAGG GGAAAACGGC CCTGCCGGCG CTTCTTGCCA TGGCAGGGGG GATAACCGCT GCCGGCGACA CGGGGCGGAT TCAGGTGGAG CGGATCGAGG GGAACAGCAC CCGGGTGGTC GCCGATTACC TGACCGATGG AAGGTCGCCG GACACTGAAC TGGCCAAGGT CGAGGTGCGG GACCACGACC TGGTGAACGT CTTCCCGGTC CGCGAGGCGA TGCGCGAGGT GGTGACCCTG GCGGGGAATG TGGCACGTCC CGGCCCCTAT CAGTTCCGGA AGGGGATGCG GGTGAAGGAC CTCATTCCCG ACGCGTCGGT TCTTCTTCCC GAGTCATACC TGGAGAGTGC CGAGATTACC CGCCTCTCGC CCACCGACTA CCGCCGCGAG GTCATGACCG TCAATCTCCG TGAGGCCTTG AAGGGGAATC CGGCCGACAA CGTGGAGTTG CAGGAGCAGG ATACGATCAA GATTTTCTCC CGGGACGAGA TGGTGGAGCG TCCCCGGGTT TCCATCAATG GACAGGTGGT GAATCCCGGC ATCTATGACT ACTTTCCCCG GATGACGGTC CGTGACCTGG TCACCGCTGC CGGCAGCCCC AAGCGCAACG CCTACCTGGA GAGCGCCGAA CTGACAAGGG TGGCGGTTGG CGGCAACAGT GCCAAGGCGT CCCGCCTGGA AATCAACCTG GGCAAGGCCC TTGCCGGAGA CCCGGCCCAC AACCTGGTGC TGGAGCCCGA AGATGCCCTG ATCGTACGGG GAATCGAGAA CTGGCTTGAG GCCACCGATC GCTTCGTGAC CCTGAGGGGA GAGGTGAAAT TCCCCGGGAC CTACTCCATT GCCAAGGGGG AGCGCCTGAG CTCGGTCATT GCCCGAGCCG GCGGTTTCAC CGACAAGGCC TATCTGAAGG GGGCCAAGTT CAAGCGGAAG TCGGTTCGCG ACGAGCAGCA GAAGAGGATG GACGAGGTGA TCACCCGAAC CGAGCAGGAA ATCCTCCGCA AGCAGGGGGA ACTGGCGGCG GTTGCGGCGT CCAAGGAGGA ACTCGAAGCG ACCCGCACGG CCCTGGAAGG GCTCCAGAAG AGCCTGGCCA AGCTGCGAGA GTCAAAGGCC GAAGGGCGTG TGGTGATCCG CCTTGCCCAA CTGGACACGT TCAGGAAGTC TCCCTATGAT CTGGAGCTCA TGGGGGGAGA CATCCTCGAA GTGCCCCAGG TTTCCAGTGT CGTGAACGTC ATGGGGCAGG TCTACAACCC CACCTCCTTT GTCCATTTGC CGGGTGAAGA TGTGGCTCAC TACCTGAAGG ATGCCGGCGG CCCCACCCGT GACGGCGAAG AAGACGACAT GTACATCATC AGCGCCGACG GGTCGGTTCT CAGCCGCCAT CAGACCTCCT TCGGCATCAG CTGGAGCGAT TCCCAGCGCC GCTGGACCTT TGGCGGGTTC CTGGCAACGC CCCTCGATCC GGGGGACACC CTGGTGGTGC CCCAGAAGCT TGAGCGGGTC GCCTGGATGC GGGAGATCAA GGACATGACC ACTATCCTGT CGCAGGTTGC CCTGACCGCC GGGGTGGTTG TGGCGGCCGG GCTGTAG
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Protein sequence | MFLSGDRSRD IRLENGDTVF VPVIGPVVAV AGEVKRPGIY EVKGKTALPA LLAMAGGITA AGDTGRIQVE RIEGNSTRVV ADYLTDGRSP DTELAKVEVR DHDLVNVFPV REAMREVVTL AGNVARPGPY QFRKGMRVKD LIPDASVLLP ESYLESAEIT RLSPTDYRRE VMTVNLREAL KGNPADNVEL QEQDTIKIFS RDEMVERPRV SINGQVVNPG IYDYFPRMTV RDLVTAAGSP KRNAYLESAE LTRVAVGGNS AKASRLEINL GKALAGDPAH NLVLEPEDAL IVRGIENWLE ATDRFVTLRG EVKFPGTYSI AKGERLSSVI ARAGGFTDKA YLKGAKFKRK SVRDEQQKRM DEVITRTEQE ILRKQGELAA VAASKEELEA TRTALEGLQK SLAKLRESKA EGRVVIRLAQ LDTFRKSPYD LELMGGDILE VPQVSSVVNV MGQVYNPTSF VHLPGEDVAH YLKDAGGPTR DGEEDDMYII SADGSVLSRH QTSFGISWSD SQRRWTFGGF LATPLDPGDT LVVPQKLERV AWMREIKDMT TILSQVALTA GVVVAAGL
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