| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1259 |
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| Symbol | |
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| ID | 3739758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1418400 |
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| End bp | 1420061 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637778539 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_384220 |
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| Protein GI | 78222473 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000947046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0000123711 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAGTG ACACCATAAA GCAGGGGATC GAACGGACTC CGCACCGAGC CCTCATCAAG
GGAACCGGGG TTCCCCAAAG CGAAATGGCA AAACCCTTCA TCGGCGTTGC CACCAGCTTC
ACTGACCTTA TCCCTGGTCA CGTAGGAATG CGTGACCTGG AGCGATTTAT TGAGAAGGGA
ATCCACAGCG GCGGCGGTTA CGCCTTTTTC TTCGGCATTC CCGGTGTCTG TGACGGAATC
GCCATGGGGC ACAAGGGGAT GCACTACTCT CTCCCGACCC GCGAACTGAT TGCCGATATG
GTTGAGTCGG TGGCCGAAGC CCATCGCCTC GATGGCCTCG TGCTGCTCAC CAACTGCGAT
AAGATCACCC CTGGTATGCT TATGGCGGCT GCTCGGCTTG ATATCCCCAC CATCGTGGTA
ACCGCCGGCC CCATGATGGC CGGCCGCGGT GTTGAAGGGC GCCGCTTTTC CTTCGTGACC
GATACTTTTG AGGCCATGGC ACGCTACAAG GCCGGTGTCA TCGATGCGAA GGAGCTTCAG
GTCTGCGAGG ACAACGCCTG TCCCGGTATG GGGTCGTGCC AGGGGCTCTT TACCGCCAAT
ACCATGGCTA TTCTCACCGA AACCCTCGGC ATGAGTCTCC CTCGTTGTGG GACGGCCCTG
GCGGTTTCCG CCCTCAAGCG TCGCATAGCA TTCGCCTCGG GTGAGAAGAT CGTGGACCTG
GTCCGCAATG GGGTTACCCC GCGCCAGATC CTGACACGTG CTGCATTTGA AAACGCCATC
CGGGTGGATC TCGCCCTCGG CGGTTCCTCT AATACGGTCC TCCACCTCCT GGCCATTGCC
CGGGAGGCAG GGGTTGATCT CCCTCTCGAA ACCTTCGATA TCCTTTCCAA GGAGACGCCG
CAGATTGCCT CCATGAATCC CGCTGGAGAG TATTTCATGG AGGATCTCGA CGCGGCCGGC
GGTGTTGTCG GGGTGTTGAA ACAACTCGGT GGCACCATTA AGGACAGCCC GACCGTCTTG
GGGCTTACCA CCCGCGAGTT GGCCTCCACG GTGGAATCGG TGGATGAGCG GGTGATCCGT
CCCGTTTCCG ACCCGGTCAA GAAAGAAGGG GGAATCGCTG TCCTCTTCGG TAATCTCGCA
CCCAAAGGTG CCGTGGTGAA GCAGTCGGGG GTGTCTGCTC CCATGATGCA GTTCGAGGGG
ACTGCCCGCT GTTTCGACTC GGAGGAACTC GCCATGGCCG CCCTCATGGG GGGGAAGATC
ACGTCTGGCG ACGTGGTGGT CATTCGTTAC GAAGGGCCCA AGGGTGGTCC GGGGATGCGG
GAGATGCTCG CACCGACCGC AACCCTCATG GGACTCGGCC TCGGCGATTC CGTTGCCCTT
GTTACCGACG GCCGTTTTTC CGGCGGCACC CGTGGCCCCT GTATCGGCCA CATATCCCCG
GAGGCGGCAG AAGGGGGCCC CATCGCCCTG GTTGAAGAGG GGGACAGGAT CCGTCTCGAT
ATTCCCAACC GGAAGCTGGA GCTCCTTGTG GATGAGTCGA TCCTCGCGGA ACGCCGCAGC
CGCTGGGTAG CCCCTGAGCC CAAGATCAAG ACCGGATGGC TTGCCCGCTA TGCCAAGGTG
GTTACTTCGG CATACACCGG CGCGGTTACC ACAGCCGAAT AG
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| Protein sequence | MRSDTIKQGI ERTPHRALIK GTGVPQSEMA KPFIGVATSF TDLIPGHVGM RDLERFIEKG
IHSGGGYAFF FGIPGVCDGI AMGHKGMHYS LPTRELIADM VESVAEAHRL DGLVLLTNCD
KITPGMLMAA ARLDIPTIVV TAGPMMAGRG VEGRRFSFVT DTFEAMARYK AGVIDAKELQ
VCEDNACPGM GSCQGLFTAN TMAILTETLG MSLPRCGTAL AVSALKRRIA FASGEKIVDL
VRNGVTPRQI LTRAAFENAI RVDLALGGSS NTVLHLLAIA REAGVDLPLE TFDILSKETP
QIASMNPAGE YFMEDLDAAG GVVGVLKQLG GTIKDSPTVL GLTTRELAST VESVDERVIR
PVSDPVKKEG GIAVLFGNLA PKGAVVKQSG VSAPMMQFEG TARCFDSEEL AMAALMGGKI
TSGDVVVIRY EGPKGGPGMR EMLAPTATLM GLGLGDSVAL VTDGRFSGGT RGPCIGHISP
EAAEGGPIAL VEEGDRIRLD IPNRKLELLV DESILAERRS RWVAPEPKIK TGWLARYAKV
VTSAYTGAVT TAE
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