Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_1248 |
Symbol | |
ID | 3738791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 1408243 |
End bp | 1409322 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637778528 |
Product | permease YjgP/YjgQ |
Protein accession | YP_384209 |
Protein GI | 78222462 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0000476298 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00398949 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCATCC TGACTCGTTA CATAGCCTCC GCCTATTTGC GGGTTTTCTG GCTCTGCCTT GCATCATTCA TAGCCATCTA CCTGGTGATT GATTTTCTGG AAAAGATCGG ACGTTTTCTT CGCTTCGATC CCCAGTGGAT ACATGTTGCC CAGTTTTTCC TCTACAAGAT CCCCGAAATC GCCACCCAGG TAATCCCTCT TGCGGTACTC ATGGCCACCC TGCTGACGCT TGGGATGCTG TCGCGCAACA GCGAGATCAT CGCCATGCGC AGTTGTGGCG TGAGCCTCCG CAAAATCAGT GCGCCAATCC TGGCCATAGC CTGTGCGGCC AGCCTTTTCG TTATCGTGTC AAACGAGCTG ATTCTGCCGA AGACCTACAG CCAGATGCGC TTCATTGAGG AGGTCCTCAT CAGGAAAAAA AGCTCGAATA CGTTCTTGCG CCAGAACAAT ATCTGGCACA AGGACAACAA AGCGATACTC ATGGCACGGG CCTTTGATCC CGACCATCAG ACGTTGAGGG GGGTAACACT GTGGTCTTTT TCGGAGGGGA TGACTCCCTC ACGGAGAATA GACGCCGAAC AGGGGAGTTG GGACGGTGGC CAATGGACTC TCTGGAAAGT CACCGTGCGG GATTTTCAGG GGGGCGGCGT TGCCAATACA ACCCAGATCG CCAGCATGCC GGTCAACCTC AACCTCCAGA TAGAAGACCT CAAAGTGGTG GACAAATACG CCGACAACAT GGGATTTCTG AAGCTGAGAG AGTATATCCA AAAGCTGAAA AAGGGGGGGT ACGAAACCAC CCGTTACGAA GCCCAGATGC ATTCAAAAAT ATCGCTTCCC TTTGCCTCGC TCATCATGGC CTTTCTCGGC ATCCCGTTCG CACTGCGGGG AAGCCGCTCC AGCGGTGTCG CCCTCGGCAT CGGCGCCAGC ATCGGCTTCG GCTTCGCCTA CTTCATCATC AACGCCATTC TCATCTCCTT CGGCCAGACC GGCGTCCTTC CCTCCCTGGT TTCAGCGTGG GCGGCAAACG TCATTTTTGC CCTCTCGGGC ATCTGGCTCG CCATGACACT CAACCGTTGA
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Protein sequence | MSILTRYIAS AYLRVFWLCL ASFIAIYLVI DFLEKIGRFL RFDPQWIHVA QFFLYKIPEI ATQVIPLAVL MATLLTLGML SRNSEIIAMR SCGVSLRKIS APILAIACAA SLFVIVSNEL ILPKTYSQMR FIEEVLIRKK SSNTFLRQNN IWHKDNKAIL MARAFDPDHQ TLRGVTLWSF SEGMTPSRRI DAEQGSWDGG QWTLWKVTVR DFQGGGVANT TQIASMPVNL NLQIEDLKVV DKYADNMGFL KLREYIQKLK KGGYETTRYE AQMHSKISLP FASLIMAFLG IPFALRGSRS SGVALGIGAS IGFGFAYFII NAILISFGQT GVLPSLVSAW AANVIFALSG IWLAMTLNR
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