Gene Gmet_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1248 
Symbol 
ID3738791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1408243 
End bp1409322 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content55% 
IMG OID637778528 
Productpermease YjgP/YjgQ 
Protein accessionYP_384209 
Protein GI78222462 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000476298 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00398949 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCATCC TGACTCGTTA CATAGCCTCC GCCTATTTGC GGGTTTTCTG GCTCTGCCTT 
GCATCATTCA TAGCCATCTA CCTGGTGATT GATTTTCTGG AAAAGATCGG ACGTTTTCTT
CGCTTCGATC CCCAGTGGAT ACATGTTGCC CAGTTTTTCC TCTACAAGAT CCCCGAAATC
GCCACCCAGG TAATCCCTCT TGCGGTACTC ATGGCCACCC TGCTGACGCT TGGGATGCTG
TCGCGCAACA GCGAGATCAT CGCCATGCGC AGTTGTGGCG TGAGCCTCCG CAAAATCAGT
GCGCCAATCC TGGCCATAGC CTGTGCGGCC AGCCTTTTCG TTATCGTGTC AAACGAGCTG
ATTCTGCCGA AGACCTACAG CCAGATGCGC TTCATTGAGG AGGTCCTCAT CAGGAAAAAA
AGCTCGAATA CGTTCTTGCG CCAGAACAAT ATCTGGCACA AGGACAACAA AGCGATACTC
ATGGCACGGG CCTTTGATCC CGACCATCAG ACGTTGAGGG GGGTAACACT GTGGTCTTTT
TCGGAGGGGA TGACTCCCTC ACGGAGAATA GACGCCGAAC AGGGGAGTTG GGACGGTGGC
CAATGGACTC TCTGGAAAGT CACCGTGCGG GATTTTCAGG GGGGCGGCGT TGCCAATACA
ACCCAGATCG CCAGCATGCC GGTCAACCTC AACCTCCAGA TAGAAGACCT CAAAGTGGTG
GACAAATACG CCGACAACAT GGGATTTCTG AAGCTGAGAG AGTATATCCA AAAGCTGAAA
AAGGGGGGGT ACGAAACCAC CCGTTACGAA GCCCAGATGC ATTCAAAAAT ATCGCTTCCC
TTTGCCTCGC TCATCATGGC CTTTCTCGGC ATCCCGTTCG CACTGCGGGG AAGCCGCTCC
AGCGGTGTCG CCCTCGGCAT CGGCGCCAGC ATCGGCTTCG GCTTCGCCTA CTTCATCATC
AACGCCATTC TCATCTCCTT CGGCCAGACC GGCGTCCTTC CCTCCCTGGT TTCAGCGTGG
GCGGCAAACG TCATTTTTGC CCTCTCGGGC ATCTGGCTCG CCATGACACT CAACCGTTGA
 
Protein sequence
MSILTRYIAS AYLRVFWLCL ASFIAIYLVI DFLEKIGRFL RFDPQWIHVA QFFLYKIPEI 
ATQVIPLAVL MATLLTLGML SRNSEIIAMR SCGVSLRKIS APILAIACAA SLFVIVSNEL
ILPKTYSQMR FIEEVLIRKK SSNTFLRQNN IWHKDNKAIL MARAFDPDHQ TLRGVTLWSF
SEGMTPSRRI DAEQGSWDGG QWTLWKVTVR DFQGGGVANT TQIASMPVNL NLQIEDLKVV
DKYADNMGFL KLREYIQKLK KGGYETTRYE AQMHSKISLP FASLIMAFLG IPFALRGSRS
SGVALGIGAS IGFGFAYFII NAILISFGQT GVLPSLVSAW AANVIFALSG IWLAMTLNR