| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1235 |
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| Symbol | |
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| ID | 3738412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1393783 |
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| End bp | 1394784 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637778515 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_384196 |
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| Protein GI | 78222449 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.391976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.26803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCCCG TTCTCCGACT TATGATCACT TATCTTGCAA AGCGACTAAT AATGATGGTT
CCGCTCCTCC TGGGGATTAC CCTCATCTCC TTTGTGGTGA TCCGCCTGGC CCCCGGCGAG
CCGGTGGAGG CCATGACCGC CATGAGCCCC AAAATCACCG CCGAGACCCG CCAGCGGCTC
CGGGAGTTCT ATGGTCTCGA CAAGCCGCTC CACGTCCAGT ACGCCACCTG GCTCAAACAG
GTGGCCACCC TCGATTTCGG CCGCTCTTTC GCCCCCGACA ATCGGCCGGT GACCGACAAG
ATCAAGGAAC GGATTCCGGT TACCATTTCC CTCAACGTCA TCGCCCTGAT CCTGGAGTTC
GGCCTTGCCA TACCCATCGG CATCTTTGCG GCCACCCACC GGGACACCCT CTACGACAAG
GGGATCACCA TCTTCGTCTT CCTGGGGTTC GCGGTGCCGA CCTTCTGGCT GGCGCTGCTC
CTCATGTACT TCTTCGGCGT TAAGTTGGGG TGGCTCCCCA TCTCGGGGCT CCACTCTCTG
GGGAGCGAGA CACTTTCCCC TATGGCGTGG TTCGTGGATT TGGCGAAGCA CCTGATCCTC
CCGGTCTCCG TGGCCACCTT CGGGAGTCTG GCGGGGCTCT CCCGCTACAT GCGCTCCACC
ATGCTGGAAG TGATCCGACA GGATTACATC ACCACGGCCC GGGCCAAGGG TCTCACGGAG
CGGGCGGTCA TCTACCGGCA CGCCCTGCGC AATGCGCTGC TGCCGGTCAT CACGCTCCTC
GGCTTCTCCC TTCCCGGCCT CATCGGGGGG AGCGTCATTT TCGAGACCAT CTTCGCCATC
CCCGGCATGG GGCAGCTCTT CTACCAGGGG GTCATGGGGC GGGATTATCC CCTTGTCATG
GGAATTCTGG TGATTGGCGC GTTCCTTACC CTTGTCGGCA ATCTCCTGGC CGATCTCTGC
TATGCCATGG CCGATCCGCG TATCAGGCAC GGGAGGGGGT AG
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| Protein sequence | MVPVLRLMIT YLAKRLIMMV PLLLGITLIS FVVIRLAPGE PVEAMTAMSP KITAETRQRL
REFYGLDKPL HVQYATWLKQ VATLDFGRSF APDNRPVTDK IKERIPVTIS LNVIALILEF
GLAIPIGIFA ATHRDTLYDK GITIFVFLGF AVPTFWLALL LMYFFGVKLG WLPISGLHSL
GSETLSPMAW FVDLAKHLIL PVSVATFGSL AGLSRYMRST MLEVIRQDYI TTARAKGLTE
RAVIYRHALR NALLPVITLL GFSLPGLIGG SVIFETIFAI PGMGQLFYQG VMGRDYPLVM
GILVIGAFLT LVGNLLADLC YAMADPRIRH GRG
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