| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1234 |
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| Symbol | |
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| ID | 3738411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1392107 |
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| End bp | 1393723 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637778514 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_384195 |
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| Protein GI | 78222448 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.871598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.318753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAC GGCTGTTCTG CTGTCTTGCG GCACTGGTTA CCCTTGTTTC GTGCAGCGGC
GGTACGCCTC CTGCGGAACT GCCGCGGCGT GGAGCAGGGG CCCCTGCCTA CGGCGATGCC
CTGGTGGTTG GCACCATTGG CGAACCATCC AACCTGATCC CGCTGCTTGC CTCCGATTCC
GCCTCCCACG ATGTGGCGGG GAACGTCTTC AACGGCCTTG TGAAGTATGA CAAGAATCTT
GAGCTGGTGG GGGATCTGGC GGAGTCGTGG CAGGTATCCC CCGACGGCCT CACCATCACC
TTCAGATTGC GCAAAGGGGT GAAGTGGCAC GACGGCACCG AGTTCACCTC CCGCGACGCC
CTCTACACCT ACCGCGTCAC CATCGATCCC AAGACCCCCA CTGCCTATGC CGAGGACTTC
AAGCAGGTGA AGAGCGCAGA AGCGCCGGAC CGGTACACCT TCCGCGTGAC TTACGGCAAG
CCCTTTGCCC CGGCTCTGGC CTCCTGGGGG GCGGGAATCC TGCCGGCCCA CCTCCTTGAG
GGGAAGGACA TCACGAAAAG CCCACTTTCC CGCCATCCCG TGGGGACCGG CCCCTACCGG
TTCAAGGAGT GGATTGCGGG GCAGAAGGTC GTCCTTGAGG CATTTCCCGA CTACTTCGAG
GGGCGGCCCT ACATTGACCG GTTCGTCTAT CGGATTATCC CCGATACTTC CACCATGTAC
CTGGAACTGA AGGCGGGCGG CCTCGACATG ATGGGGCTTA CGCCGGTCCA GTACGCCCGG
CAGACCGATA CCCCCGATTT CCTGGCCCGT TTCAATAAGT TCCGCTATCC GGCCTCTGCG
TACACCTACC TGGGATACAA TCTCCGCAAC CCTCTTTTCG CCGACCGGCG GGTCCGACAG
GCCATTGCCT GCGCCATCAA CAAGGACGAG ATAGTCCACG GGGTGCTTCT GGGGCTGGGG
CAGGTGGCCC ACGGGCCCTT CAAGCCGGGA ACCTGGCCAT ACAACCCTTC CGTGAGGGAC
TTCGGCTACG ACCCGGCCCG GGCAAAGGCG TTGCTGGCAG AGGCGGGGTG GCACGCGGTC
GGGCCCGATG GTATCCTTAC GAAAGACGGC AAGCCCTTCA GTTTCACGAT TTTTACCAAC
CAGGGAAACG ACCAGCGGCT CAAGACCGCC CAGATCATCC AGCGTCGCCT CGCAAAGGTT
GGGATCGAGG TGAAGATCCG GGTTCTGGAG TGGGCGTCGC TTCTCACCAA CTTCATCGAC
AAGCGGAATT TCGACGCCCT CATCATGGGA TGGACCATTC CCCAGGATCC GGATATCTTT
GATGTGTGGC ATTCCAGCAA GACCGGCCCC AAGGAACTGA ACTTCATCGG GTTCAAGAAC
GCCGAGGTGG ACCGGCTCAT CGAAGAGGGG CGCAGTACCT TCGATCAGGA AAAGCGCAGG
CGCTGCTACT GGCGCATCCA GGAAATACTC GCCCAGGAGC AGCCCTACAC GTTTCTCTTC
GTCCCCGATG CCCTGCCGGT CGTGAATGCC CGCTTCCGGG GGATCGAGCC AGCGCCGGCC
GGAATCATGC ACAACATCAT CCGGTGGTAT GTGCCCAAGG AAGAGCAGGT GCATTAA
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| Protein sequence | MTARLFCCLA ALVTLVSCSG GTPPAELPRR GAGAPAYGDA LVVGTIGEPS NLIPLLASDS
ASHDVAGNVF NGLVKYDKNL ELVGDLAESW QVSPDGLTIT FRLRKGVKWH DGTEFTSRDA
LYTYRVTIDP KTPTAYAEDF KQVKSAEAPD RYTFRVTYGK PFAPALASWG AGILPAHLLE
GKDITKSPLS RHPVGTGPYR FKEWIAGQKV VLEAFPDYFE GRPYIDRFVY RIIPDTSTMY
LELKAGGLDM MGLTPVQYAR QTDTPDFLAR FNKFRYPASA YTYLGYNLRN PLFADRRVRQ
AIACAINKDE IVHGVLLGLG QVAHGPFKPG TWPYNPSVRD FGYDPARAKA LLAEAGWHAV
GPDGILTKDG KPFSFTIFTN QGNDQRLKTA QIIQRRLAKV GIEVKIRVLE WASLLTNFID
KRNFDALIMG WTIPQDPDIF DVWHSSKTGP KELNFIGFKN AEVDRLIEEG RSTFDQEKRR
RCYWRIQEIL AQEQPYTFLF VPDALPVVNA RFRGIEPAPA GIMHNIIRWY VPKEEQVH
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