| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1222 |
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| Symbol | |
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| ID | 3738399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1377707 |
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| End bp | 1378489 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637778503 |
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| Product | hemolysin A |
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| Protein accession | YP_384184 |
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| Protein GI | 78222437 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1189] Predicted rRNA methylase |
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| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.000687315 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTCTC CCGCATCTCC ATCCGGAATC CGCAACAGGG AGCGCCTCGA CAAGCTCCTG
GTGGACCGGG GGCTCGTTCA GTCCCGGGAG CGTGCCCGCG CCCTCATCAT GGCTGGCCAG
GTGGTGGTGA ACGACCATCT GGCGGACAAA GCTGGAACCC AGGTGCCCCT GGACGCCGAT
ATCCGCCTCA AGGGGGAGGA TATCCCCTTT GTGAGCCGCG GCGGGCTCAA GCTTGCCCGG
GCACTTGACG AGTTCGGCCT CGACGTGACG GACATGGTTG CCATCGACGT GGGGGCTTCC
ACCGGCGGCT TCACCGATTG CCTGCTCCAG CGAGGGGCCC GCAAGGTCTA CGCCGTTGAC
GTGGGGTACG GCCAGCTGGC CTGGAAACTC CGTCAGGACC CGCGCGTGGT GAACCTCGAG
AAGACCAACA TCCGGTACCT GGAGCCGGAC GCACTCCCTG AGGTTCCTGA CCTGGCAGTC
ATCGACGCCT CGTTCATCTC CCTAGACAAG GTGCTCCCCC CGACCCTTCG CCTCATTCGT
GACGGCGGCG CCGTTGTCGC GCTCATTAAG CCCCAGTTCG AGGTGGGAAA GGGCGAAGTG
GGGAAAGGGG GGGTCGTGCG GGATGAAGGG AAGCACCGGG AGGTGGTTGA CAATGTCGTT
GCCCTGGCCG AATCCCTCGA TCTTCAGGTG GGGGGCATAA CCGAATCGCC GATTCTCGGG
CCGAAGGGGA ACCGGGAATT TCTGATCCAT CTGATTAAAC GGCACATTTC CCCTAATTCA
TAA
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| Protein sequence | MTSPASPSGI RNRERLDKLL VDRGLVQSRE RARALIMAGQ VVVNDHLADK AGTQVPLDAD
IRLKGEDIPF VSRGGLKLAR ALDEFGLDVT DMVAIDVGAS TGGFTDCLLQ RGARKVYAVD
VGYGQLAWKL RQDPRVVNLE KTNIRYLEPD ALPEVPDLAV IDASFISLDK VLPPTLRLIR
DGGAVVALIK PQFEVGKGEV GKGGVVRDEG KHREVVDNVV ALAESLDLQV GGITESPILG
PKGNREFLIH LIKRHISPNS
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