| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1215 |
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| Symbol | |
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| ID | 3738755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1366263 |
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| End bp | 1369730 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637778495 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_384177 |
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| Protein GI | 78222430 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000331804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00000568126 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTTTG TTCACCTCCA TCTCCATACC CAGTATTCCC TCCTCGATGG CGCGATACGC
CTCGGCGATC TGATAAAGAA AGCCAAGGAT ACCGATATGC CCGCCGTGGC CATCACCGAC
CACGGGGTGA TGTTCGGCGC CATGGAGTTC TACCTCAAGT GCAAGGACAA GGGGGTGAAG
CCGATTATCG GCTCCGAGGT CTATATCGCC CCCGGCTCCC GCTTCGTGAA AGAGGTGAAG
GGGGGAGAGG CCGGCGCCGG TTACCACTTG CTCCTTCTCT GTGAGAACAT GACCGGCTAC
CGGAACCTGT CGAAGCTGGT CTCCGTCGGG TTCAAGGAGG GCTTTTACTA CAAGCCCCGC
ATCGATAAGG AGGTTTTGGC CCAGTACTCC GAGGGGCTCA TCTGTCTCTC CGCCTGCCTG
AAGGGTGAGG TGGCCTATCT CTGCGAGCGG GACCGGATGG AGGAGGCGAT TGGGGTGGCC
CGCTGGTACG CTGACCTCTT TCCCGACCGC TACTACATCG AGCTTCAGGA GAACGGTCTT
GCGGAGCAGG ACAAGGCCAA CAAGGGGCTC CTGGAGGTGG CGCGGGAGGT GGGACTGCCG
CTGGTGGCCA CCAATGACTG CCACTACCTG AACCGGGAGG ATGCCCGCGC CCATGAGGTG
CTCCTCTGCA TACAGACCGG CAAGACCATG AACGATTCGG CGCGGATGCG CTTTTCCACC
GACGAGTTTT ACGTGAAAAC CCCTGAGGAG ATGGCCGCCG CGTTCCACTA CGCGCCGGAA
GCCGTTTCCA ATACCGTGAA GATTGCCGAA CGGTGCAACC TCGACTTTGA TTTCAAGACC
TACTATTTCC CCCAATTCGA TCCCCCCGTT GGGCAGACCC TCGATCAGAT GCTGGAGGAT
GCGGCCCGCA AGGGGCTTGA GTTCCGTCTC AAGGAAATCA GGCTCAAAAA CCCCGACATG
TCCCCGGAGC AGGAGCAGAA GTACTGGGAG CGGTTGCGCA TCGAGCTGGA CTGCATCACG
CAGATGGGGT TCCCCGGCTA CTTCCTCATC GTGGCCGACT TCATCAACTG GGCCAAGGAC
CACGGCATCC CCGTGGGGCC GGGACGGGGC TCGGCGGCCG GCTCCCTGGT TGCCTATTCC
ATCCGGATCA CTGACCTGGA TCCGCTCCCC TACAATCTCC TCTTCGAGCG CTTCCTGAAC
CCGGAACGGA TATCCATGCC TGATATCGAC GTGGACTTCT GCCAGGACCG CCGCGAGGAG
GTTATCCACT ACGTCACCGG GAAATACGGC CGCGACCAGG TCTGCCAGAT CATCACCTTC
GGGACCATGT CTGCCCGGGC CGTCATCCGC GACGTGGGGC GCGCCCTGGA CATGACCTAC
GGCGATGTGG ACAAGATCGC CAAGCTGGTG CCGGAGGTGC TCGGCATCAA GCTCAAGGAC
GCCATTGCCC AGGAGCCCCG CCTGAAGGAG GCGTCCGAGG CCGACTCCCG CGTGAAGGAG
TTGCTGGAGA TTGGCCTGCG CCTCGAAGGG CTCGCCCGCC ACGCCTCCAC CCACGCGGCC
GGCGTCGTGG TGGCCCCCAA GGTGCTCGAA GAGTTCTGCC CCGTCTACAA GGACCAGAAG
ACCGGCTCCC TCACCACCCA GTACTCCATG AAGTACGTGG AGAAAATCGG CCTCGTGAAG
TTCGACTTTC TGGGGCTCAA GAACCTGACG GTCATCCATA ACGCGGTGAA GATCATTCGG
GCCGGTAAGG ACCCCAACTT CGACATCGCG GCCCTGCGGG ACGACGACCG GGCCAGTTAC
GATCTCATCT CTGCCGGCAA CACCACCGGC GTCTTCCAGC TCGAATCCAG CGGCATGAAG
GATATGCTGG TAAAGCTGAA GCCTTCCTGC TTCGAGGACG TCATTGCCGC CTGCGCCCTC
TACCGGCCGG GCCCCCTCGG CTCGGGGATG GTGGACGACT TCATCGACCG CAAGCACGGC
CGCAAGAAGG TGGTCTACGA CCTGCCGCAA CTGGAGCCGA TCCTCAAGGA CACCTACGGG
GTCATCGTCT ACCAGGAGCA GGTCATGCAG ATCGCCCGGA CCCTGGCGGG CTACTCCCTG
GGGGGCGCCG ACCTGCTGCG GCGCGCCATG GGTAAGAAGG ACCCGGCGGA GATGGCCAAG
CAGCGGGACA TCTTCCTGGA AGGGGCCAAG AACGGTGGGG TCGATCTCCA GAAGGCGGGA
GCCATCTTCG ACCTCATGGC AAAGTTCGCC GAATACGGCT TCAACAAGTC CCACTCGGCT
GCCTACGCCC TTGTTGCCTA CCAGACCGCC TATCTCAAGG CCCACTACCC GGTGGAGTTC
CTGGCCGCTC TCCTCACCGA GGATATGGGG AACACCGACA AGGTGGTGAA GACCATTTCC
GACTGCCGGG AGATGGGGAT CGAGATCCTC CCCCCTGACA TCAACGACTC CCATCTCTCC
TTCCGTGTTC TGGGAAACTC CATCCGCTTC GGCCTCGGGG CCGTGAAAAA CGTGGGAGAG
GGGGCCATCG AGGCGATTAT CGAGGCGCGG CAAGAGGGAG ATTTCAAGGA TCTCTTCGAC
TTCTGCGAGC GGGTCGATCT CCACAAGGTC AACAAGCGGG TGGTGGAATC CCTCGTAAAG
TGCGGTGCCT TCGACTCCAC CGGCGGCCGC CGCTCCCAGC TCATGTCGGC CCTGGAGGAT
GCCATGGCCA TCGGCCAGAA GATCCAGCAG GAGCGGGAGA GCGCCCAGGT CTCCCTCTTC
GGTGTCGAAG AGATCGTCCG GACCAACGGC AACGGCAAGG GGAAGGTGCA GCTCCCCGAT
ATCCCCGAAT GGGACGACAA GCTGAAGCTG GGCCTGGAGA AGGAGGCCCT CGGCTTCTTC
ATCACCGGCC ACCCCCTGGG GCGCTACGAG AAGGAAATCA AGCGCTTCGC CAACGTGGAT
ACTGCCACCC TCGACGAGCG CGCCGACAAG AGCGAGGTTA AGCTCTGCGG CATCGTCACC
TCCCTCAAGG AGCTGATTAC CAAGAAGGGG GACCGGATGG CCTTCGCCAC CCTGGAGGAC
CTGCTCGGTT CCGTGGAGGT GGTGGTCTTC CCCGAGGCTT TTGCCGCCGG GTCCGAGTAC
CTCAAATCCG ACGATCCGCT CCTTATATCG GGCACCATCG ACAAGGGGGA GAAGAGCATC
AAGATCATGG CCAATGAGGT GATGCTCCTG CGAGACGTGA GCAGCCGGGA AACGAAACGA
GTGATCTTTA ATCTTGTGGG CGACGGCCTC GACCGGAGCC GCCTGGAGAC CCTCAAGGGG
ATCATGCGCC GCCACCCCGG CAGCTGCAAG ACGCTTCTGG CCATCGAGAT TCCGGCCCAG
TGCCGGGCCA CCATCGCCCT TTCCGATTCG TACCAGGTGG CCCCCACCGA GGAACTCTCC
CTTGAAGTGA AGAACCTCTT CGGCTATCAT GCCGTGTCTT TTGAGTAA
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| Protein sequence | MSFVHLHLHT QYSLLDGAIR LGDLIKKAKD TDMPAVAITD HGVMFGAMEF YLKCKDKGVK
PIIGSEVYIA PGSRFVKEVK GGEAGAGYHL LLLCENMTGY RNLSKLVSVG FKEGFYYKPR
IDKEVLAQYS EGLICLSACL KGEVAYLCER DRMEEAIGVA RWYADLFPDR YYIELQENGL
AEQDKANKGL LEVAREVGLP LVATNDCHYL NREDARAHEV LLCIQTGKTM NDSARMRFST
DEFYVKTPEE MAAAFHYAPE AVSNTVKIAE RCNLDFDFKT YYFPQFDPPV GQTLDQMLED
AARKGLEFRL KEIRLKNPDM SPEQEQKYWE RLRIELDCIT QMGFPGYFLI VADFINWAKD
HGIPVGPGRG SAAGSLVAYS IRITDLDPLP YNLLFERFLN PERISMPDID VDFCQDRREE
VIHYVTGKYG RDQVCQIITF GTMSARAVIR DVGRALDMTY GDVDKIAKLV PEVLGIKLKD
AIAQEPRLKE ASEADSRVKE LLEIGLRLEG LARHASTHAA GVVVAPKVLE EFCPVYKDQK
TGSLTTQYSM KYVEKIGLVK FDFLGLKNLT VIHNAVKIIR AGKDPNFDIA ALRDDDRASY
DLISAGNTTG VFQLESSGMK DMLVKLKPSC FEDVIAACAL YRPGPLGSGM VDDFIDRKHG
RKKVVYDLPQ LEPILKDTYG VIVYQEQVMQ IARTLAGYSL GGADLLRRAM GKKDPAEMAK
QRDIFLEGAK NGGVDLQKAG AIFDLMAKFA EYGFNKSHSA AYALVAYQTA YLKAHYPVEF
LAALLTEDMG NTDKVVKTIS DCREMGIEIL PPDINDSHLS FRVLGNSIRF GLGAVKNVGE
GAIEAIIEAR QEGDFKDLFD FCERVDLHKV NKRVVESLVK CGAFDSTGGR RSQLMSALED
AMAIGQKIQQ ERESAQVSLF GVEEIVRTNG NGKGKVQLPD IPEWDDKLKL GLEKEALGFF
ITGHPLGRYE KEIKRFANVD TATLDERADK SEVKLCGIVT SLKELITKKG DRMAFATLED
LLGSVEVVVF PEAFAAGSEY LKSDDPLLIS GTIDKGEKSI KIMANEVMLL RDVSSRETKR
VIFNLVGDGL DRSRLETLKG IMRRHPGSCK TLLAIEIPAQ CRATIALSDS YQVAPTEELS
LEVKNLFGYH AVSFE
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