| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1206 |
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| Symbol | |
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| ID | 3738746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1352332 |
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| End bp | 1353135 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637778486 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_384168 |
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| Protein GI | 78222421 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.000328954 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.0411335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGAAC TCCCCGAGGT AGAACTGACC CGCCGCAGGC TGGAGCGGGA ACTGACCGGC
AAGAGGATCG ACCGAGTGGT GGTGCGGACG CCGAAGCTCC GTTTTCCGAT CCCCCAGGAG
CTGCACGTTT CCCTGCCGGG GCGGACGGTG CGATCCGTGG GACGACGGGG CAAGTACCTG
CTGTTTGACT GTGAAACGGG GTGGCTCATC GTCCATCTGG GGATGACCGG CTTTCTCCGT
CTGGTTGCCG GGACGGCGCC CCCGGGCAAA CACGACCACC TGGACATCGT CTTTGCCGAT
GGCACGGTGC TCCGTTTCCA CGACCCGCGA AAGTTCGGCA CCGTGGCCTG GACCACGGAT
GCCCCCGCAA CGCATCCGCT CCTGGCCGCA ATCGGCCCGG AACCGCTGAC CGCCACCTTT
GACGGCGCCT ATCTCTTCGC GGTGACCCGG ACGCGCCGGG TCGCGGTGAA ACAGCTCCTC
ATGAACGCGG CCATTGTTGC CGGAGTCGGC AACATCTACG CCAACGAGGC CCTGTTCCGC
GCCGGCATCC GTCCCGACCG GCCCGCTTCC TCCCTCGGCC GCCCTGAATG CGAGCGGCTG
GCCCGCACCG TCCGGGAGGT GCTGCAGGAG TCCATTGATC AGGGGAGCAC CTACCGGGTG
GAGGAAGAGA CGGTCGCCTA CCATCCGCTG AATTTCGATG TTTATGGGCG GGGCACTGAC
GCCTGCACCC GCTGCGGCGG GGCGCTGGAG GAGATCCGGC TCGGCAACCG GAGCACGGTC
TTCTGCCCCC GCTGTCAAAC GTGA
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| Protein sequence | MPELPEVELT RRRLERELTG KRIDRVVVRT PKLRFPIPQE LHVSLPGRTV RSVGRRGKYL
LFDCETGWLI VHLGMTGFLR LVAGTAPPGK HDHLDIVFAD GTVLRFHDPR KFGTVAWTTD
APATHPLLAA IGPEPLTATF DGAYLFAVTR TRRVAVKQLL MNAAIVAGVG NIYANEALFR
AGIRPDRPAS SLGRPECERL ARTVREVLQE SIDQGSTYRV EEETVAYHPL NFDVYGRGTD
ACTRCGGALE EIRLGNRSTV FCPRCQT
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