Gene Gmet_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1172 
Symbol 
ID3739945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1295864 
End bp1296301 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID637778448 
Productputative lipoprotein 
Protein accessionYP_384135 
Protein GI78222388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000330219 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0707527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAGA CAGTATTGGT CGCTCTTGCA GTTGCATCAC TTGCCGCAGC CGGATGCAAG 
GAGAAGCCGA AAGCCCCTGA GACTACAGCA CCGCAGCAGA GCGGCATGCC CGCCCAGCCT
GGCCAAGGCC AAATGCCCAG TGATGCAGTC CACGGCGGCG CCAACCCCCA CGCCGGCCTG
AAGGCCGTCG AAGTACCTGC CGGTGCAGGC CATAAGGGAA AGGTTGTCTC CACCATGGAC
GCTGCCGGAT ACACCTATCT TGAGGTAGAG GAAAAGGGCC AGAAACTTTG GGTTGCCGTC
ATGCAAACCA AGGTCAAGGT TGGCGACGAA GTCGAGTTCC CCGACTCTCC GCCGATGGTC
AACTTCCACA GCAAGACCCT CAACCGGACC TTCGAAAAGA TTATTTTCGC TCCTGGCGTC
CGGATTGCCG GCAAGTAA
 
Protein sequence
MKKTVLVALA VASLAAAGCK EKPKAPETTA PQQSGMPAQP GQGQMPSDAV HGGANPHAGL 
KAVEVPAGAG HKGKVVSTMD AAGYTYLEVE EKGQKLWVAV MQTKVKVGDE VEFPDSPPMV
NFHSKTLNRT FEKIIFAPGV RIAGK