Gene Gmet_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1154 
Symbol 
ID3740381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1280246 
End bp1281322 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID637778430 
Producthypothetical protein 
Protein accessionYP_384117 
Protein GI78222370 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000550105 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0344505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGAG GACACTTCTA CGCGCTGGTG GCATTTTCCT TTTGTGCGAT TCTCGGTTAC 
GTGGTCTATG CCATTGTGTC ACCGTTTCTG AACTCCCTCG GCTGGGCTGC CGTGATCGGC
ATACTTACCT TCCCCATTTA TCGTCGACTG CGTGCGGGGC TCGGCGCACG GGACACGCTT
GCCGCTGGAC TCATGACTCC TGCCACGGTT CTCACTCTCG TCGTACCCTT TGTGGGGCTT
ACCTTTTTTC TCGTTCAGGA GGCAGCCGTC GCCTACGGTT TCCTCGAAAA GATTGCCGCC
GATGGGGGCG AATCCCTGGT GATGAGCATC CAGAATCATC CCGTTGTCAA GCCGTGGATC
GCGCGCATCG AGGCTTACAC CGGCCCACTC GGCTTTGAGA TCGACACCCG GTTCCTCCCC
GAAATGAAGG AAGTGGCGGC AAGGGTGCTC AACTACTCCA AGGAGATCGT CAAGAACGTC
TTTATCTTCA GCATCAAGCT GCTCCTGATG GTGATTACCC TCTTTTTCAT CTACCGTGAC
GGCGAGCGGG TCCAGCGCCA TGCCCTTGCC GTCATCCCCC TCACGGAAGC CAACAAGCAG
ATCCTCACCG ATACGGTTCG CCGCGTTCTG AAGGCGGTCA TGTATGGCGT CTTTCTCACC
TGCCTCGTTC AGGGTGCTCT CGGCGGCATC GGGTTTTGGG CGGCGGGGCT CCCTTCGCCG
CTTCTTTTCG GGGCCATCAT GGCGGTCTGC GCCCTCATTC CGGTGGTGGG GACGGGGCTC
ATCTGGCTTC CCGCCGCCAT CTACCTCCTG GCAAACGGCG AGGTCGTGAA GGGAATCGGG
CTCATTATCT GGGGATTCGT TGCGGTGAGT TCCATCGACA ACGTGATCAG GCCCTTCTTC
ATCAGCGGCA GGGCAAAGCT GCCAGTCCTG GTCATTGCCA TCGGCGGCCT CGGCGGATTG
GCCTCTTTCG GGCTTCTGGG CGCGGTGGCT GGCCCCATCG TGCTGGCGCT TTTCCTGGCA
CTGTTCGAGA TGTATCGGGA TGAGGTGGAA ACGGGGGAGG GTAGGGGCAA TTCATGA
 
Protein sequence
MDRGHFYALV AFSFCAILGY VVYAIVSPFL NSLGWAAVIG ILTFPIYRRL RAGLGARDTL 
AAGLMTPATV LTLVVPFVGL TFFLVQEAAV AYGFLEKIAA DGGESLVMSI QNHPVVKPWI
ARIEAYTGPL GFEIDTRFLP EMKEVAARVL NYSKEIVKNV FIFSIKLLLM VITLFFIYRD
GERVQRHALA VIPLTEANKQ ILTDTVRRVL KAVMYGVFLT CLVQGALGGI GFWAAGLPSP
LLFGAIMAVC ALIPVVGTGL IWLPAAIYLL ANGEVVKGIG LIIWGFVAVS SIDNVIRPFF
ISGRAKLPVL VIAIGGLGGL ASFGLLGAVA GPIVLALFLA LFEMYRDEVE TGEGRGNS