| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1113 |
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| Symbol | |
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| ID | 3741570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1235484 |
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| End bp | 1236914 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637778391 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_384078 |
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| Protein GI | 78222331 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.301961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGCA CCATTACCAT AGACCCCGTC ACCCGCATCG AGGGGCATGC CACCATCACC
ATCCGGCTCG ATGATGCCGG CTCCGTGGCG GACGCCCGGC TCCACGTCAC CGAGTTCCGG
GGCTTCGAGG CCTTCTGCGT AGGGCGGAGC ATCTGGGAGA TGCCGGGCAT AACGGCCCGC
ATCTGCGGCA TCTGCCCCAT CAGCCACTCC ATCGCCTCCG CCCGGGCCGG CGACGCCATC
CTCGGCGTGG ATATCCCCCC GGCCGCAGAG CAGCTGCGGC GCATCGCCAA CCTGGCCTCC
CTCATCCAGA GCCACGCCCT CAGCTTTTTC CACCTCTGCG CCGCCGATCT CCTCCTGGGG
ATGGACCACG ACCCGTCCCG CCGCAGCCTC TGGGGGCTTC TGGAGAGTCG CCCCGACGTG
GCCCGGCGCG GTATCAGGCT GCGGCAGATC GGCCAGCAGA TCGTGAGCAA CCTGGCGGGT
GAGAGGGTCC ACCCCTCCTG GGCCGTCCCC GGTGGGGTCC GGGAGCCCCT TGATGCCGAG
CGGCGCCGGA AGGTCGTCGA ACTACTCCCC GAGGGAATTG CCATCATCCG CTCGGCTTTC
GAGCTGCTCG ACGAGATCTA CGGACGCCAT GGCGCCGAGG TCGGCACCTA CGGCGATTTT
CCCTCCCTGT TCGCCGGCCT TGTGGGGGAG GACGGAGGAC TCGAGCACTA CGACGGCATG
CTCCGCTTTA CCGACAGCTC CGGTGCCGTG GTGGAGGAGG TCCCCCCTGA CCACTACGAC
CTCGCCATCG GCGAGAGGAG CGAACCGTGG AGCTACATGA AATTCCCTTT CTACCGCAAC
CATGCCGGGC GTGATGGGGG AGGGATGTTC CGGGTGGGGC CCCTGGCCCG TCTTAACCTC
TGCGAACGGG CCGGCACCCC CGAGGCTGAC CGGGAACTGC AGACATTCCG GCAGCTGCGG
GGCACGGGAG GGGTGGTCAC CGGCAGCTTC CACTACCACC ATGCCCGGCT CATAGAGATC
CTCCACGCCC TGGAGCGGAT TGGCGAGTTG CTGGACGATC CCGCCATCCT TGACCGTCAC
GTCCGGAGCG AGGCGGGGGT CAACCGCCGA CACGGCGTCG GCTTCTGCGA AGCCCCCCGG
GGGACCCTCT TCCACGACTA CGAGGTGGAC GACGACGGCC TCATTCTGCG CCTCAACCTC
CTCATTGCCA CCGGGCAGAA CAACCTGGCC ATGAACCGGA CCATCCTGGA GGTGGCCAGG
TCGCATATCA AGGGGGGGAA AGTGAGCGAG GGGATTCTGA ACCGGATCGA GCACGGCATC
CGCGCCTACG ACCCGTGCCT CTCCTGCGCC ACTCACGTCT ACGGCAGAAT GCCGTTCCAG
GTGTTGCTCC TGGCGCCGGA TGGGACGGTG GTGGATGAGA TAGCGAGCTA A
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| Protein sequence | MSRTITIDPV TRIEGHATIT IRLDDAGSVA DARLHVTEFR GFEAFCVGRS IWEMPGITAR
ICGICPISHS IASARAGDAI LGVDIPPAAE QLRRIANLAS LIQSHALSFF HLCAADLLLG
MDHDPSRRSL WGLLESRPDV ARRGIRLRQI GQQIVSNLAG ERVHPSWAVP GGVREPLDAE
RRRKVVELLP EGIAIIRSAF ELLDEIYGRH GAEVGTYGDF PSLFAGLVGE DGGLEHYDGM
LRFTDSSGAV VEEVPPDHYD LAIGERSEPW SYMKFPFYRN HAGRDGGGMF RVGPLARLNL
CERAGTPEAD RELQTFRQLR GTGGVVTGSF HYHHARLIEI LHALERIGEL LDDPAILDRH
VRSEAGVNRR HGVGFCEAPR GTLFHDYEVD DDGLILRLNL LIATGQNNLA MNRTILEVAR
SHIKGGKVSE GILNRIEHGI RAYDPCLSCA THVYGRMPFQ VLLLAPDGTV VDEIAS
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