Gene Gmet_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1104 
Symbol 
ID3738597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1227267 
End bp1228340 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content66% 
IMG OID637778382 
Productmannose-1-phosphate guanylyltransferase (GDP) 
Protein accessionYP_384069 
Protein GI78222322 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000227796 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0231218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTCG TCATCCTCGC CGGCGGCTCC GGCACCCGTT TCTGGCCCCT GTCCCGCAAA 
CTCCATCCCA AGCAACTCAT GTCGGTCTTC GGCGGCAAGT CGATGCTCCA GCGAACCGCG
GAACGGGTTC TCCCCCTTAA CCCCAAGCGA ATACTCGTGA TCACCAACCA CCTCCAGGCC
GAGGAAACCC GGCGCCAGCT GGAGTATCTG CGGGGCGTCC GGATCGAGGT GATCGAGGAA
CCCCTGGGGC GCAACACGGC CCCCGCCATC TGCCTCGCCG CCACCCTCAT TGCCCGCCAC
GACCCCGAAG CGGTGATGGC GGTGCTCCCC GCTGACCATT TCATCCGTGA CGAGGATGCA
TTCTGTGCCA CCATCCAGAA GGGGAGGGAG GCGGCCCTGA ACGGCTACCT GGTCACCCTG
GGAATCACCC CTGACCGCCC CGAGACCGGT TACGGCTACA TCGAGGCCGA GACATCGCTG
CGGGGTGACG GGCCCTACCC GGTAAAGAGG TTCGTGGAAA AGCCCGACCG CGAGAGGGCC
CTGGAGTTCC TTGCCGCCGG CACCTTCTTC TGGAACAGCG GCATGTTCCT CTGGCGTGCC
GACGTGATCC TTGGCCAGAT GGCAGCCCAT ATGCCGGAAC TGGCTCAGGC CTTTGCCGGC
ATCACCTTTT CCCCCGACAT CTGGGAACCG GCCGACCTGG CCCCCCAGAT CGAGGCGGTT
TACGCCATGG TCAAAGGGGA GTCCATCGAC TATGGCGTCA TGGAGAAGGC CGATAGTGTG
GCCATGATCC CGGCTTCCTT CGGGTGGAGC GACGTGGGGA GCTGGAGCGC GCTCCCCGAG
GTGATGGAGC CCGACGCGGC CGGCAACGTG GTCATCGGCG CGCCGGAAAC GGTCATTGCC
GATGCCGCCG GCTGCATCCT CCGTGGCGAG AAGCTCATGG CACTGGTCGG GGTTCGGGAT
CTCGTGGTGG TCGATACCCC CGACGCCCTC CTGGTCTGCG CCAAGGACAG GGCCCAGGAC
GTGAAGAAAG TGGTGGAGGA GCTGGAGCGG CGCGGCCTGA GGCGCTGCCT CTGA
 
Protein sequence
MYVVILAGGS GTRFWPLSRK LHPKQLMSVF GGKSMLQRTA ERVLPLNPKR ILVITNHLQA 
EETRRQLEYL RGVRIEVIEE PLGRNTAPAI CLAATLIARH DPEAVMAVLP ADHFIRDEDA
FCATIQKGRE AALNGYLVTL GITPDRPETG YGYIEAETSL RGDGPYPVKR FVEKPDRERA
LEFLAAGTFF WNSGMFLWRA DVILGQMAAH MPELAQAFAG ITFSPDIWEP ADLAPQIEAV
YAMVKGESID YGVMEKADSV AMIPASFGWS DVGSWSALPE VMEPDAAGNV VIGAPETVIA
DAAGCILRGE KLMALVGVRD LVVVDTPDAL LVCAKDRAQD VKKVVEELER RGLRRCL