| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1097 |
|---|
| Symbol | |
|---|
| ID | 3738590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 1220836 |
|---|
| End bp | 1221627 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637778375 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_384062 |
|---|
| Protein GI | 78222315 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.000323114 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCTGC TGGCCTACCT GGCCCTCGGC GCCTTTGCCG GCGTCCTGGC GGGGCTTCTC
GGCGTGGGGG GAGGAATCGT CATCGTGCCG GCCCTCACCT TCCTCTTCAC CGCCCAGGGG
CTTCCCGCTC CCTACATCGC CCACCTGGCG CTGGGGACCT CCCTCGCCAC CATCATCTTC
ACCTCGGTGT CGAGCCTGCG AGCCCACCAT GGCCGGGGAG CCGTAGAGTG GCGGGTGGTG
CGCCGCATCT CCGCCGGCAT CGTCGCCGGC ACCCTGGCCG GGAGCTGGGT GGCGGCACAG
CTGTCGACCC GCTCCCTCAA GGTCTTCTTC GTGGTCTTCC TCTACTACGT GGCAATCCAG
ATGCTCCTCA ACATCCGGCC CAAACCCTCG CGCCAACTGC CGGGCACGGG AGGGATGCTC
GGCGTCGGGG GGGTCATCGG AGCGGTTTCC AGCCTCGTGG GGATCGGCGG CGGGAGCCTG
TCGGTCCCGT TCATGGTCTG GTGCAACATA TCAATGCACA ATGCCATCGG CACCTCGGCC
GCCATTGGCT TCCCCATAGC CCTGGCCGGA GCTGCCGGCT ACATGGCGAA CGGCCTCGTG
GTCACGTCCC TTCCCCCCTG GTCCGTCGGT TTTGTGTACC TCCCGGCCCT GGCCGGCATC
GCCCTGGCGA GCGTCATTAC TGCCCCCTTC GGCGCACGCC TTGCCCACAA CCTTCCCGTA
TCAGGCCTCA AGAAGATCTT CGCCCTGCTC CTCATCGTCA TGGGGACAAA GCTCCTTTCA
GGGCTCCTGT AA
|
|---|
| Protein sequence | MFLLAYLALG AFAGVLAGLL GVGGGIVIVP ALTFLFTAQG LPAPYIAHLA LGTSLATIIF
TSVSSLRAHH GRGAVEWRVV RRISAGIVAG TLAGSWVAAQ LSTRSLKVFF VVFLYYVAIQ
MLLNIRPKPS RQLPGTGGML GVGGVIGAVS SLVGIGGGSL SVPFMVWCNI SMHNAIGTSA
AIGFPIALAG AAGYMANGLV VTSLPPWSVG FVYLPALAGI ALASVITAPF GARLAHNLPV
SGLKKIFALL LIVMGTKLLS GLL
|
|---|
| |