Gene Gmet_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1079 
Symbol 
ID3741286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1201010 
End bp1201480 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID637778357 
ProductCheW protein 
Protein accessionYP_384044 
Protein GI78222297 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.000657241 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATACGC CTGAAAGAAC CATCCCCCAT GAATACCTCA CCTTCACCCT CGGAGCAGAG 
GAGTACGGCA TCGATATCCT GAAGGTGCAG GAGATCCGGG GCTATGACGC CGTAACCCGC
ATCGCCAACT CCCCCGAATT CCTCAAGGGG GTCATCAACC TGCGGGGGGT TATCGTCCCC
ATCGTCGACA TGCGGATCAG ATTCAACCTC GGCACCCCCA CCTACGACGA ATTCACCGTG
GTCATCATCA TGAACGTGCT GAACCGGGTC ATCGGCATGG TGGTGGACGG CGTCTCCGAC
GTGGTGGCCC TGGAGCCGGA GCAGATCAGG CCGGCCCCGG AGATGGGGTC GGCCCTGGAT
ACCCGCTACC TGACCGGCCT CGGCACCGTG AACGGCCAGA TGCTCATCCT CATGGACATC
GAGAAGCTCC TGAGCAGCAG CGAGATGCAG CTCATGGACA GTGCAGCCTG A
 
Protein sequence
MDTPERTIPH EYLTFTLGAE EYGIDILKVQ EIRGYDAVTR IANSPEFLKG VINLRGVIVP 
IVDMRIRFNL GTPTYDEFTV VIIMNVLNRV IGMVVDGVSD VVALEPEQIR PAPEMGSALD
TRYLTGLGTV NGQMLILMDI EKLLSSSEMQ LMDSAA