| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1068 |
|---|
| Symbol | |
|---|
| ID | 3739515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1190026 |
|---|
| End bp | 1190565 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637778346 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_384033 |
|---|
| Protein GI | 78222286 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.0377724 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATA ATCCCGATAT TCACCATCGC CGTTCCATCC GCCTGCGGGA ATATGATTAT
TCCTCAGGCG GTGTGTATTT CGTGACGATG TGTGTCCAAG GGCGTGAATG TCTGTTCGGC
GGGGTGGTCG ATGGGGTCAT GCAGTTGAAC GAGGCGGGGC GGATGGTGGT GGGAACATGG
CACGGGTTGG CGGAGCGGTT TCCCAACATG ACGACGGACG AATTCATCGT CATGCCGAAC
CATGTTCACG GGATCATGGT GGTTCAAGAA AATGAAATTG GTGGTGGTGT AGGGGCAATT
CATGAATTGC CCCTACAGGT GGCTCGTCGA AATATGGTGA TCCCGAAAAT AATCGGCTAT
TTCAAGATGA ATACCGCTAA ACAGATCAAC ATAATGCGCG GCAGTGCAGG CATTCCCGTA
TGGCAGCGCA ATTATTACGA ACGGGTTATC CGAGATGAAA GGGAATTTAC CAGCATCCGG
GAATACATCC GTTGCAATCT CCTGAAATGG GCCGATGACG AAGAAAACCC AGACCCTTAG
|
|---|
| Protein sequence | MTYNPDIHHR RSIRLREYDY SSGGVYFVTM CVQGRECLFG GVVDGVMQLN EAGRMVVGTW
HGLAERFPNM TTDEFIVMPN HVHGIMVVQE NEIGGGVGAI HELPLQVARR NMVIPKIIGY
FKMNTAKQIN IMRGSAGIPV WQRNYYERVI RDEREFTSIR EYIRCNLLKW ADDEENPDP
|
|---|
| |