| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0983 |
|---|
| Symbol | |
|---|
| ID | 3738087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1091291 |
|---|
| End bp | 1091770 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637778262 |
|---|
| Product | biotin carboxyl carrier protein |
|---|
| Protein accession | YP_383950 |
|---|
| Protein GI | 78222203 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0511] Biotin carboxyl carrier protein |
|---|
| TIGRFAM ID | [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000000000287572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.038382 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCA AGGATCTCAA GTCGCTGATA AAGATGGTAA CGGAAACAGA CATCACCGAA
TTCGAGCTGG AGGGGGCCGA GGAGAAAATC CGGATCAAGC GCGGGTGCAC GGCTCCGATG
GTCCAGTACC AGGCACCCCA GCCCATGGTC GCCATGCAGC CGGCCATGGT CCAGGCCGCT
GCTCCGGCTG CATCGGCCGC CCCCGTGGAA GCTGCCGCGC CGGCAGCCGC CAAGGCCAAG
GGGAATGAAA TCACGTCCCC CATCGTCGGT ACCTTCTACC GGGCCCCGGC GCCGGATGCC
GCTCCCTATG TGGAAGTGGG ACAGATTATC GAGAAGGGGC AGGTTCTCTG CATCGTCGAG
GCCATGAAGC TCATGAACGA GATCGAGGCC GAGTATCGGT GCAAGATTGT CGAGATTTGC
AAGGAAAACG CCCAGCCGGT CGAGTTCGGC GAGGCGCTGT TCATCGTCGA GCCGCTCTAA
|
|---|
| Protein sequence | MDIKDLKSLI KMVTETDITE FELEGAEEKI RIKRGCTAPM VQYQAPQPMV AMQPAMVQAA
APAASAAPVE AAAPAAAKAK GNEITSPIVG TFYRAPAPDA APYVEVGQII EKGQVLCIVE
AMKLMNEIEA EYRCKIVEIC KENAQPVEFG EALFIVEPL
|
|---|
| |