| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0874 |
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| Symbol | |
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| ID | 3739304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 962940 |
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| End bp | 964235 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637778153 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_383841 |
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| Protein GI | 78222094 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00249518 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGAGAG TGGCGATTTC AACCCTGGGT TGCAAGATCA ACCAGTTCGA GTCGGCGGCC
ATGACCGAGA GCCTCGGTAG GGAAGGGTTC CGGGTGGTCC CCTTTGACGA GGATGCCGAC
ATTTACGTGA TCAACACCTG CACGGTGACC GCGAAAACCG ATGCCGAGTC GCGGCGCCTG
ATTCGTCGCG CCCTGCGCCG CAATCCCGCG GCCCGGGTGG TGGTGACCGG CTGCTACGCC
CAGGTGGCCC CCGATGCGGT GAAAGATCTT CCTGGCGTGG CTCTGGTGGT GGGGAATAGC
GAGAAGCGGA GCATCGGCGA GCTTTTGCGG GACGCTGCCC CGGCGGAAAA GGTCATGGTG
TCGGACATTT CCCGGGAGCG GACCGCGGAG GGGCTCCGTC TCGAAAGCTT TGCCGAGCAT
ACCCGGGCCT TCCTCCAGGT CCAGAACGGG TGCGATGCCT TCTGCTCCTA CTGCATCGTC
CCCTATGCCC GGGGGCGGAG CCGGAGCGTC TCCTTCAGCG AAGCCCTCGC AGGGATCAGG
AACTTCGCCG CCCAGGGGTT CCGGGAGGTG GTGCTGACCG GCATCCACCT GGGGGCCTAC
GGCCTTGACC TTGCCCCGCC GACGAACCTC CTGGCGCTTC TGGAGGCCTC CGAGGCGGAA
AAGGCGGTGC CGCGGCTCCG GGTCGGGTCG GTGGAGCCCA ATGAACTGAC CGACGCTCTC
GTTGATTTCC TGGCCCGGTC GGAGACGGTC TGCCCCCACC TCCACATCCC GCTCCAGAGC
GGCGATGACC GGGTGCTCGA ACGGATGGGG CGGCGCTACA CGGCGGCGTT CTTCCGGGAA
CGGGTGGAAC GGCTCGTGGC GGTGGTCCCC GACATCTTCA TCGGCTGCGA CGTCATTGCC
GGTTTTCCGG GAGAGACTGA CGAGGAGTTC CAGAACACCG TACGTCTCAT CGAGGAACTG
CCGGTGGCCT CCCTCCACGT CTTCCCCTAT TCCCGGCGGG AGGGGACGGC GGCTGCCCGG
ATGGAGGGAC AGGTGGATGG GAAGGTGATT CGCGGCCGGG CTGAGATCCT GAGGGAGGTT
GGCGAGCGTA AGCGGCGCTC TTTCTGCGAG CGGTTCGTGG GGCGTGAGCT GGCGGTCCTG
ATGCAGAACC GGGGCCGTGA CGGCGAAGCT GTGGGGCTGT CGCGCAACTA CCTGCCGGTC
CGGGTGCCCG GCTACGCAGG GGAGATGAAC GCCGAGGCGA CGGTCATGGT CACGGAGGTG
ACGCCGGACG GAGTGGGGGG AATCATCCGA GGGTAA
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| Protein sequence | MQRVAISTLG CKINQFESAA MTESLGREGF RVVPFDEDAD IYVINTCTVT AKTDAESRRL
IRRALRRNPA ARVVVTGCYA QVAPDAVKDL PGVALVVGNS EKRSIGELLR DAAPAEKVMV
SDISRERTAE GLRLESFAEH TRAFLQVQNG CDAFCSYCIV PYARGRSRSV SFSEALAGIR
NFAAQGFREV VLTGIHLGAY GLDLAPPTNL LALLEASEAE KAVPRLRVGS VEPNELTDAL
VDFLARSETV CPHLHIPLQS GDDRVLERMG RRYTAAFFRE RVERLVAVVP DIFIGCDVIA
GFPGETDEEF QNTVRLIEEL PVASLHVFPY SRREGTAAAR MEGQVDGKVI RGRAEILREV
GERKRRSFCE RFVGRELAVL MQNRGRDGEA VGLSRNYLPV RVPGYAGEMN AEATVMVTEV
TPDGVGGIIR G
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