| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0832 |
|---|
| Symbol | |
|---|
| ID | 3738286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 917464 |
|---|
| End bp | 918450 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637778110 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_383799 |
|---|
| Protein GI | 78222052 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000430219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.313635 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG TTCTGCTCAA TGGTTTCGGC GGTCTCGATG TGCTCACGGT GGGGGAGGTT
GAGAGGCCGA AACCGGGGGA GGGGCAGGTT CTTGTGAAAG TGGTGGCAAC GTCCATCAAT
CGTCCGGACC TGGTGCAGCG GGAAGGGAAG TATCCCCCTC CGCCGGGCGA TTCTGAGATC
CTGGGGTTGG AGGTTTCCGG CACCGTTGAA GAGTTGGGCC CCGGCGTGAC CGGCTGGCAG
GTGGGGGACC GGGTCATGAC GCTGGTGGGT GGCGGCGCCT ACGCCGAGTA TGCCGTGGCC
TACGCCAGTC ACCTGATGCG GATCCCCGAG TCCATGAGCT TCGAGGAGGC GGCCTGCGTC
TGCGAATCGT GCATCACGGC GTTTCTCAAC GTCTTCATGA TCGGCGGCCT CAAGGACAAC
AACACCGTCA TCCTCCACGG CGGCGGCGGG GGGGTAAATA CCGCCGGCCT TCAACTCTGC
AAGGCCCTGG TTCCCAATAC GAAGATCATC GTCACCTCCC ATCCGAGCAA GATGGCGCGG
GTGAAGGAAC TGGGCGCCGA CCTGGTCATC GACTTCACCC AGACCCCCGA TTTCTCGGAG
GCGGTGAAGG AGTTCACCAA CAAGAAGGGG GCTGACGTGA TCCTCGACCA TGTGGGGGCC
AAGTACCTGG CGCCCAACAT GAACTCCCTG GCCTATGCCG GCCGCCTCGT CATCATCGGG
GTCATCAGCG GCATCAAGGC GGAGTTGAAC CTGGCCCTCA TGATGGTGAA GCGGCAGCAG
ATCATCGGTT CCGTGCTCCG CTCCCGCCCC GTGAAGGACA AGGGGGAGAT CGTTGCCGAG
TTCACCAGAA CGGCGCTGCC GAAATTCGCC GACCGGACCA TTGTCCCCAT CATCGAGAAG
GTGTTCACCA TCGACCAGGT GGTGGAAGCC CACCGGATGA TGGAAGAAGA CAAGCACTTC
GGGAAGATCG TGCTGAAGAT ATCGTAG
|
|---|
| Protein sequence | MKAVLLNGFG GLDVLTVGEV ERPKPGEGQV LVKVVATSIN RPDLVQREGK YPPPPGDSEI
LGLEVSGTVE ELGPGVTGWQ VGDRVMTLVG GGAYAEYAVA YASHLMRIPE SMSFEEAACV
CESCITAFLN VFMIGGLKDN NTVILHGGGG GVNTAGLQLC KALVPNTKII VTSHPSKMAR
VKELGADLVI DFTQTPDFSE AVKEFTNKKG ADVILDHVGA KYLAPNMNSL AYAGRLVIIG
VISGIKAELN LALMMVKRQQ IIGSVLRSRP VKDKGEIVAE FTRTALPKFA DRTIVPIIEK
VFTIDQVVEA HRMMEEDKHF GKIVLKIS
|
|---|
| |