Gene Gmet_0734 details

Gene Information

• Locus tag: Gmet_0734
• ID: 3740540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter metallireducens GS-15
• Kingdom: Bacteria
• Replicon accession: NC_007517
• Strand: +
• Start bp: 807268
• End bp: 807666
• Gene Length: 399 bp
• Protein Length: 132 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637778012
• Product: N-terminal methylation
• Protein accession: YP_383701
• Protein GI: 78221954
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4967] Tfp pilus assembly protein PilV
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.00844444
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 85
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCAGCC GTTTGAACCA GAAAGGGTAT ACCCTCGTTG AGATGCTGAT TGCCATGTTT 
CTTCTGGTGG TTGGCTTTCT GTCGGTTTTT CTGGTGCTCT GGGCCTCTAC AACGTCGGGG 
CGTTTCAGTC GAGACATGAC GACCGCGGCA AACCTTGGCC AGGATATGCT GGAGCGGATC 
GGTACCATGA AGTATGACGA TTTGCCTGAA ACAAGCGGAT TTCAGAACTA TCCGGAACCG 
TTCGGCGACA AGAGCCTGGC TGCCGCTGCC TTCGAGGCGC GACAGTGGCG GATATCTTCG 
GCCGGCAGCA TGAAGATCGT GACCGCCAGG ATATCGTGGA TCAAAAACGG CGCCAGGAAG 
ACAAGGGATT TCACCATGGT CAGGCGGAAA GAGTACTAG 

 

Protein sequence

MTSRLNQKGY TLVEMLIAMF LLVVGFLSVF LVLWASTTSG RFSRDMTTAA NLGQDMLERI 
GTMKYDDLPE TSGFQNYPEP FGDKSLAAAA FEARQWRISS AGSMKIVTAR ISWIKNGARK 
TRDFTMVRRK EY