| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0653 |
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| Symbol | |
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| ID | 3738302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 713367 |
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| End bp | 714389 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637777931 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_383620 |
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| Protein GI | 78221873 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00000970006 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACAGAA ACTGGCGTGA CCTGATCAGC CCCAAGAAGC TTCAGGTTGA GAGTGAATCG
CTTACCAATA CATACGGAAA ATTTTTTGCT GAGCCCTTCG AACGTGGATT TGGAACGACA
CTCGGAAACT CGCTGCGAAG AGTGCTTCTT TCATCACTTC AGGGTGCCGC GATTTCTTCC
GTGAAAATTA AGGGAGTGCT CCACGAGTTT TCATCCATCC CCGGTGTGAC TGAGGATGTT
ACGAATATCA TACTCAATCT CAAAGGTGTC AGCCTCAAGA TGCACGGAAA TGAGGCCCGC
ACAGTACGTA TTATTCACAA AGGTGACGGG ATTGTTAAGG CAGGCGATAT TGTCACCGAT
GCAAATGTTG AAATTCTGAA CCCAGACCAC CATATTGCCA CCTGTTCGAA GGATGCCAAT
CTGGAGATGG AGATGGTGGT AAAGCTGGGC AAGGGGTATG TGCCTTCGGA TCGTAACCGT
GATGAGAAGG CTCCGGTTGG AACGATGCCG ATCGATGCCA TATTCTCTCC CATCAAGAAA
GTGAATTTCA CTGTCTCAAA TGCTCGTGTA GGTCAAATGA CCGACTATGA CAAGCTGACT
CTTGAAGTCT GGACGAACGG CAGTGTTGTT CCGGAAGATG CTGTTGCGTT TGCTGCAAAG
ATTCTTAAGG AGCAACTGAG CATTTTTATC AACTTCGATG AAGAAGCCGA ACCTGCTGAG
GAAGCGGAAA CCGAGGAGGA GCGTGAACGG GTTAACGAGA ACCTTTATCG CTCCGTAGAC
GAGCTCGAAC TGTCCGTACG CTCGGCAAAC TGCCTCAAAA ATGCCGGTAT CAAGATGATT
GGCGAACTTG TTTCGCGTTC CGAGGCTGAG ATGCTCAAGA CACAAAACTT CGGGCGCAAA
TCCCTGAACG AGATCAAGGA TATTCTCGCA GATATGGGAC TTACTCTCGG GATGAAGCTG
GATGGCTTCC CTGACCCTGA GGTTATGCGT AGGATCCGTG GGGAGCGGAA GGACGAAGAA
TAA
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| Protein sequence | MYRNWRDLIS PKKLQVESES LTNTYGKFFA EPFERGFGTT LGNSLRRVLL SSLQGAAISS
VKIKGVLHEF SSIPGVTEDV TNIILNLKGV SLKMHGNEAR TVRIIHKGDG IVKAGDIVTD
ANVEILNPDH HIATCSKDAN LEMEMVVKLG KGYVPSDRNR DEKAPVGTMP IDAIFSPIKK
VNFTVSNARV GQMTDYDKLT LEVWTNGSVV PEDAVAFAAK ILKEQLSIFI NFDEEAEPAE
EAETEEERER VNENLYRSVD ELELSVRSAN CLKNAGIKMI GELVSRSEAE MLKTQNFGRK
SLNEIKDILA DMGLTLGMKL DGFPDPEVMR RIRGERKDEE
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