Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0646 |
Symbol | secY |
ID | 3738353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 708986 |
End bp | 710293 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637777924 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_383613 |
Protein GI | 78221866 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00379524 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.000000811889 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGATAGAGG CGTTTCAAAA CATCTTCAGA ATACCGGAAC TTAAAAAGCG AGTTCTTTTT TCATTAGGGA TGCTCGCCGT TTACCGGGTA GGGTGCCATA TTCCGACTCC AGGGATCGAC AGCACCGCAC TTGCACACTT CTTTGCACAA GCCCGTGGTA CACTCCTCGG GCTTTTCGAC ATGTTTTCGG GGGGTGCTCT GGAGAAGCTT ACGGTATTTG CTCTGGGCAT CATGCCGTAC ATTTCGTCCT CTATTATCTT TCAGTTGTTG ACGGTAGTTG TCCCTGCCAT CGAAAAACTT TCAAAAGAAG GCGAATCTGG CCGCAAGAAG ATTATTCAGT ACACGCGGTA TGGAACTATC GTTTTGAGCG TTGTTCAGGC TCTGGGCATT AGTATCGGAC TCGAAAGCAT GCGTGGACCA GCCGGTGAGC TTGTGGTGCC GAGTCCTGGC TGGGGATTTA GATTTATGAC CGTTATTACT CTGACCGCTG GCACAGCCTT CATTATGTGG CTTGGCGAGC AGATGTCGGA GAAGGGCATT GGTAACGGTA TCTCCTTGAT CATTTTTGCC GGTATTGTTG CAAGGATTCC GGTGGCGCTG GGCAACTCGG TGCGGCTGCT CAAGACAGGT CAAATTTCTC TCTTTGTAAT CTTGTTTATA CTTGTTCTCA TGTTCTTGGT TATCGCTGCG ATCGTTTTTG TTGAGCGCGG CCAGCGCCGA TTGCCAATAC ACTATGCTAA ACGTGTCGTA GGGCTGAAGA CGTACGGTGG TCAGACGTCC CACCTTCCTC TCAAGGTAAA TATGGCGGGG GTAATACCGC CGATCTTTGC TTCTTCGATA ATTATGTTTC CTGCAACAGT GGCAAACTTC ATTAATATTC CCTGGGTCCA ATCCGCAGCA AAGAGCCTGA CGCCCGGCAA CTGGGTATAT GACATATTTT ATGTTGCTTT TATCGTATTC TTCTGTTATT TCTACACGGC TGTTTCTTTT AACCCCGTCG ATGTGGCAGA TAACGTTAAA AAGCACGGCG GTTATATACC AGGCATTCGC CCCGGTAAGG AAACCTCCGA GTATTTGGAT CGAGTGCTCA CGAAGTTGAC GTTTGCAGGT GCGATTTATA TTTCAGCTGT TTGCGTTCTT CCTTCTATTC TTATAGGTAA ATTCAATTTG CCGTTTTACT TTGGAGGAAC GGCGCTCCTT ATTGCGGTGG GTGTGGGGAT GGATACCGCT GCTCAGATTG AGTCCCATTT GATAACCCGG AGTTATGAAG GGTTTATGAA GGGGGTAAGG GTTAGGGGGA GGAAGTAG
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Protein sequence | MIEAFQNIFR IPELKKRVLF SLGMLAVYRV GCHIPTPGID STALAHFFAQ ARGTLLGLFD MFSGGALEKL TVFALGIMPY ISSSIIFQLL TVVVPAIEKL SKEGESGRKK IIQYTRYGTI VLSVVQALGI SIGLESMRGP AGELVVPSPG WGFRFMTVIT LTAGTAFIMW LGEQMSEKGI GNGISLIIFA GIVARIPVAL GNSVRLLKTG QISLFVILFI LVLMFLVIAA IVFVERGQRR LPIHYAKRVV GLKTYGGQTS HLPLKVNMAG VIPPIFASSI IMFPATVANF INIPWVQSAA KSLTPGNWVY DIFYVAFIVF FCYFYTAVSF NPVDVADNVK KHGGYIPGIR PGKETSEYLD RVLTKLTFAG AIYISAVCVL PSILIGKFNL PFYFGGTALL IAVGVGMDTA AQIESHLITR SYEGFMKGVR VRGRK
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