Gene Gmet_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0640 
SymbolrpsH 
ID3738347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp706457 
End bp706855 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content47% 
IMG OID637777918 
Product30S ribosomal protein S8 
Protein accessionYP_383607 
Protein GI78221860 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000399724 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0000000361155 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGATGA CTGACCCTAT TGCCGATATG CTCACAAGGA TACGAAATGC CAGCATGGCA 
AAGCTCCAGA AGGTGGATAT TCCGTCTTCT AACTTGAAAG TGAGCTTGGC GAATGTCCTT
AAGGCAGAAG GTTTTATCAA GAATTTTAAG GTGATCGCTG ATAACAAGCA AGGCGTTTTG
CGTGTTTATC TCAGATTTAT TGATGAGAAA GAACCTGTCA TCAGAGAGAT AAAGCGTGTG
AGTAAACCTG GTAGTAGGGT GTACGTTGGT AGTGATGAGA TTCCTAGCGT GAAGAGTGGG
ATGGGGGTCG CTATTCTGTC AACGTCCAAG GGTATCCTCA CCGACAAGGT TGCTCGCGAG
GCGGGCGTCG GCGGTGAAGT TATCTGTACT GTCTGGTAA
 
Protein sequence
MSMTDPIADM LTRIRNASMA KLQKVDIPSS NLKVSLANVL KAEGFIKNFK VIADNKQGVL 
RVYLRFIDEK EPVIREIKRV SKPGSRVYVG SDEIPSVKSG MGVAILSTSK GILTDKVARE
AGVGGEVICT VW