| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0638 |
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| Symbol | rplE |
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| ID | 3738345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 705678 |
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| End bp | 706217 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637777916 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_383605 |
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| Protein GI | 78221858 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000000002891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000000142331 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCAGGC TGAATGAGCT TTACAAGAAC GAGATCGTCC CTCAGTTGAC GAAGGACTTT
GGATACTCGA ACATAATGCA GGTTCCCAAG ATTGAAAAGA TAGTTGTTAA CATGGGCCTT
GGAGAGGCAA TCCAGAATGT CAAGATCCTG GACTCGGCTG TCGAAGAGCT CGCCATGATA
ACTGGGCAGA AATCAGTTAT TACAAAAGCA AAGAAATCTA TCGCAAGTTT TAAACTGCGT
CAAGGGATGC CCATTGGCTG TATGGTTACG CTTCGCCGTG AAAAGATGTT TGAATTCCTT
GATCGGCTCA TAAATGTAGC GCTTCCACGT GTTCGAGACT TTAAGGGTGT GTCGGGTAAG
GGTTTTGATG GACGTGGCAA TTATTCCCTT GGCATCAAAG AACAGCTTAT TTTCCCTGAG
ATTGAATACG ATAAGATCGA CAAGATCAAA GGGCTCAACA TAACCATAGT AACGTCAGCA
CGAAGCGATG AAGAAGGCAA GGCACTGCTC AAGCAACTTG GGATGCCTTT CAGGAACTAA
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| Protein sequence | MARLNELYKN EIVPQLTKDF GYSNIMQVPK IEKIVVNMGL GEAIQNVKIL DSAVEELAMI
TGQKSVITKA KKSIASFKLR QGMPIGCMVT LRREKMFEFL DRLINVALPR VRDFKGVSGK
GFDGRGNYSL GIKEQLIFPE IEYDKIDKIK GLNITIVTSA RSDEEGKALL KQLGMPFRN
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