| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0605 |
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| Symbol | truA |
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| ID | 3738952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 676216 |
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| End bp | 676986 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637777879 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_383573 |
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| Protein GI | 78221826 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000000000709788 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.00819756 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCGGGA CGCCCTCCAG GGCGTCCTTG ATTTTTATGC ATACCATTAA ACTTGTTCTC
GAGTACGACG GCACAAACTA CGCGGGCTGG CAGATTCAGC CCAACGGCAT CTCTGTCCAG
CAGGTGGTCG AAGAGGCGTT GGCGAGGCTG CTGAAGGAAC CGGTTCGCGT GCATTCCTCT
GGCCGCACCG ATGCCGGTGT CCACGCCCGG GGCATGGTTG CCGCCTTCAC CACTGCCAAA
GGGCTGCCGA TGCGGGCCTT CTCCGATGGG CTCAATGCGC TTCTTCCTCC CGATATCGCT
GTGATGGAAG CGCTGGAGGC TCCGGACGGC TTTAATCCGC GCTTTGACGC CGCAGGCAAG
CACTACCGCT ATACCATACA CCGGGGGGAG CGCCGTTCTC CCCTTTGCCG CCACTATGTC
TGGCACGCGA GGGAGACGCT CGATCTGGCA GCCATGGAAA AGGGGGCCAG CCATATGGTC
GGTGAGCATG ATTTCGCCTC TTTTCGCACA GCAGGTTGTG CCGCGCGGAC CACAGTCCGA
CGGATAGATG CCGTGGACCT GGCACTGGAA GGGGATCTCC TCCATATTGA CGTAAAGGGT
TCCGGATTCC TGCGCAACAT GGTCCGGATC ATGGTTGGCA CCCTGGTGGA GGTTGGCCGG
GGGAGGCGGA GTGCCGATGA CGTGGCGCTT CTGTTTCGGT ATCCTGGAGA ACGTTTTGCC
GGCCCGACAG CCCCCCCTCA GGGGCTGTGC CTCATGGAAG TCTATTATTG A
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| Protein sequence | MSGTPSRASL IFMHTIKLVL EYDGTNYAGW QIQPNGISVQ QVVEEALARL LKEPVRVHSS
GRTDAGVHAR GMVAAFTTAK GLPMRAFSDG LNALLPPDIA VMEALEAPDG FNPRFDAAGK
HYRYTIHRGE RRSPLCRHYV WHARETLDLA AMEKGASHMV GEHDFASFRT AGCAARTTVR
RIDAVDLALE GDLLHIDVKG SGFLRNMVRI MVGTLVEVGR GRRSADDVAL LFRYPGERFA
GPTAPPQGLC LMEVYY
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