| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0485 |
|---|
| Symbol | |
|---|
| ID | 3738318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 529268 |
|---|
| End bp | 531661 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637777759 |
|---|
| Product | cobyric acid synthase CobQ:precorrin-3B C17-methyltransferase region |
|---|
| Protein accession | YP_383453 |
|---|
| Protein GI | 78221706 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1010] Precorrin-3B methylase
[COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ
[TIGR01466] precorrin-3B C17-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGC TCTACGTCGT CGGCATCGGT CCCGGCGACC TCGACCATAT GACCTTCCAG
GCCAACGAGG CCCTTGACGC CGCCGATGTG GTGGTGGGGT ACAAGACCTA CCTGGACCTG
ATCGCCCCTC TCATCGCCGG CAAGGAGATT ATCTCCTCCG GAATGATGAA GGAGGTGGAG
CGCTGCCGCG AAGCCTTGGA CCTGGCCGCC TCGGGGAAGA CGGTGGCCCT GGTCTCCAGC
GGCGACGCCG GCATCTACGG CATGGCGGGG CTCGCCCTGG AGCTGGCGGC GGAGTTGGTC
GCCCCCCCCG AGATCGTAGT GGTTCCCGGC GTTTCGGCCG TGCAGGCGGC TGCAGCGGTC
CTCGGCGCTC CCCTTATGCA TGATTTCACC GTCATCTCCC TCTCGGATCT CCTGACCCCG
TGGGACCTCA TCGAACGGCG GCTTGTGGCC GCCGCCACGG CCGATTTCGT CGTAGCCCTC
TACAACCCCC GGAGCAAGGG GCGGGTGCAG CAGATCGAGG AGGCCCGGCA GATCCTCCTG
TCTGCCCGGC CGGCCGATAC CCCGGTGGGG ATCGTCCGCA ACGCCTTGCG GGAGGGGGAG
GAGCGGATCG TCACCACCCT CGGAAGGATG CTCGACCACC CCATCGATAT GTTCTCTCTG
GTCATCGTGG GGAACTCTGC CACCTTCGTC GACCCGGCGG GGCGGATGGT GACCCCGCGC
GGCTACGCCG CCGGGATCCG GGACCGGGGA CCAGGGGAAA AGGCCGGGAC CGGGGACCAG
GGACCAGGGA CCAGGGAAAA ACAAAAAAAA CCAGTCACTG AGTACTCGGT GGATTCCCCG
TCTCAGATTT TGAATTCCCG GTCCCCGGTC CCTGGTCCCC GGTCCCGGTC TTTGATGGTG
GTCGGTACGG CCTCCGATGT GGGCAAATCG GTCCTCACGG CCGGCATCTG CCGCATCCTC
AAGAACCGGG GGCTCCGGGT GGCCCCCTTC AAGTCCCAGA ACATGGCCCT CAACTCGGCG
GTCACCCCCG AGGGAGGGGA GATCGGCCGG GCCCAGGCGG TACAGGCGGC GGCCTGCGGC
ATCCCCCCCC ATGCCGACAT GAACCCGATC CTCCTGAAAC CCTCCTCCGA TACGGGAAGT
CAGGTCATCG TCGCGGGTGA GGTGGTGGGG AATATGTCGG TGCGGGAGTA CCACGCCTAT
AAACCCATGG CTTTCGAGCA GGTACGGGAA AGTTTTGACC GCCTCTCCTC GGCCCACGAT
GTCGTGGTCA TCGAGGGGGC CGGAAGCATC GCCGAGATCA ACCTGAAAGC CCACGACATC
GCCAACCTGA AGGTGGCCGA GATGGCCGGA TGCCGGGCCA TCCTCGTGGC CGACATTGAC
CGGGGCGGGG TCTTCGCCCA GATCGTGGGG ACCCTGGAGC TTCTGGAGCC GGCGGAGCGG
GAGCGGATCG CGGGCATCGT CATCAACAAG TTCCGGGGGG ATGCCTCGCT TCTCACGCCG
GGAATCAAGT TCGTGGAGAA GCGGACCGGG GTGCCGGTTC TGGGGGTGGT CCCCTGCTTC
AGCGGCTTCC GCATCCCCGA GGAGGACAGC GTCGCCCTGG AAAAACGGGG ATCGGGGACC
GGGGACCGGG GACCGGGGGA AAAGCTCAAA ATCGGGGTGG TGAAGCTGTC GCGGATCTCC
AACTACACCG ACTTCGACGC CTTGGAAGCG GAACCCGACG TGCGTCTTAC CTACGTGGAA
GGGGCGGACC AGCTCCGGGG GCTCGATCTC CTCATTATCC CCGGGAGCAA GGCGACCACC
ACCGACCTCT ACTTCCTCAT GGAGCGGGGG CTCTTCGAGG CGATCCGGGC CTTTCAGGGG
CTCATCGTGG GCATCTGCGG CGGCTACCAG ATGCTGGGAA AGCGGGTCTC CGACCCCCAC
GCCGTGGAGT CGGGGATCCG GGAGGCCGAA GGGCTGGGTC TTCTGGACGT GGTGACGGTG
ATGCTGGAAA AGAAGACCAC CCACCAGGCC CGGGCGGAAC TCCTGCCGGC GGGGTACCAG
GTGGCTCCCC GCTGCCGGGG CGAGCTGGAG GGGTACGAAA TTCACATGGG GGAAACGATC
CTCGGTCCGA GCGTCCGCCC CTTTGCCCGG GCCACGGAAC GGTCGGGGCG GGCGGTGGAG
GTGCTGGACG GCGCCGTCTC CTGCGACGGC CGGGTCTTCG GCACTTACCT CCACGGCATC
TTCGACAACG CCGGTTTCCG CTCCGCCTTC CTCAACAAGC TCCGGCGGGC CAAGGGGCTT
GTTGAGCGCC CCGCGGCGGA GGCGCAGGAC GACCCCTTTG ATCTCCTGGC GGCCCACCTG
GAGAAGCACC TGGACATGGA GCGGCTCCTG GCCGTCTGCG GGCTTGCCCG GTGA
|
|---|
| Protein sequence | MSKLYVVGIG PGDLDHMTFQ ANEALDAADV VVGYKTYLDL IAPLIAGKEI ISSGMMKEVE
RCREALDLAA SGKTVALVSS GDAGIYGMAG LALELAAELV APPEIVVVPG VSAVQAAAAV
LGAPLMHDFT VISLSDLLTP WDLIERRLVA AATADFVVAL YNPRSKGRVQ QIEEARQILL
SARPADTPVG IVRNALREGE ERIVTTLGRM LDHPIDMFSL VIVGNSATFV DPAGRMVTPR
GYAAGIRDRG PGEKAGTGDQ GPGTREKQKK PVTEYSVDSP SQILNSRSPV PGPRSRSLMV
VGTASDVGKS VLTAGICRIL KNRGLRVAPF KSQNMALNSA VTPEGGEIGR AQAVQAAACG
IPPHADMNPI LLKPSSDTGS QVIVAGEVVG NMSVREYHAY KPMAFEQVRE SFDRLSSAHD
VVVIEGAGSI AEINLKAHDI ANLKVAEMAG CRAILVADID RGGVFAQIVG TLELLEPAER
ERIAGIVINK FRGDASLLTP GIKFVEKRTG VPVLGVVPCF SGFRIPEEDS VALEKRGSGT
GDRGPGEKLK IGVVKLSRIS NYTDFDALEA EPDVRLTYVE GADQLRGLDL LIIPGSKATT
TDLYFLMERG LFEAIRAFQG LIVGICGGYQ MLGKRVSDPH AVESGIREAE GLGLLDVVTV
MLEKKTTHQA RAELLPAGYQ VAPRCRGELE GYEIHMGETI LGPSVRPFAR ATERSGRAVE
VLDGAVSCDG RVFGTYLHGI FDNAGFRSAF LNKLRRAKGL VERPAAEAQD DPFDLLAAHL
EKHLDMERLL AVCGLAR
|
|---|
| |