| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0352 |
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| Symbol | lspA |
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| ID | 3739718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 393644 |
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| End bp | 394132 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637777625 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_383320 |
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| Protein GI | 78221573 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.947194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0144306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCCA ACTACCGCAT TTTCTCAATC GTCACGGCGG TGTCCCTGGT AATCGACCAG
GCGACCAAGA TTCTCGTGGA CCGGACCCTG GAGCTCTACC AGTCCATTCC GGTGGTCCCC
GGGCTCTTCA GCATCACCTA CATGCGGAAC AAGGGGGCGG CGTTCAGCTT CCTCTCGAAC
TTCGATTACC GCCGCCCCTT TTTCATCGCA GTCACGCTGG TGGCCATGGC GGCCATCGCC
ATCACCTTCC GCAAGCTCCG GGACGACCAG CGACTGGCGG CAGTTTCCCT TTCCCTCATC
TTCTCCGGTG CTGTCGGCAA TCTCATCGAC CGGGTGCGGC TCGGCGAGGT GATCGACTTC
CTCGACGTCT ACTGGAAAAC CCACCACTGG CCCGCCTTCA ACGTGGCCGA CTCCGCCATC
TGCGTTGGCG TGGCGCTCCT CGCCCTCGAC ATGATCCGCG ACGAGCGGCG CCAGTCCAAA
GATAATTAA
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| Protein sequence | MKPNYRIFSI VTAVSLVIDQ ATKILVDRTL ELYQSIPVVP GLFSITYMRN KGAAFSFLSN
FDYRRPFFIA VTLVAMAAIA ITFRKLRDDQ RLAAVSLSLI FSGAVGNLID RVRLGEVIDF
LDVYWKTHHW PAFNVADSAI CVGVALLALD MIRDERRQSK DN
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