Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0328 |
Symbol | |
ID | 3740626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 364629 |
End bp | 365417 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637777601 |
Product | cytochrome c, class I |
Protein accession | YP_383296 |
Protein GI | 78221549 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000000605449 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0000000937241 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGAGAG GAATTCTCCG AGCAGCAGTC AGCCGCGTAT GTCTGGTTCT GGTGCTGTCC CTTGCGGCGC ACGCATACGG TGATCCGGGC AAGGACCTGT TCGACAAACA GTGTTCAGGC TGCCACACCG TCGGCGGCGG CGATTCGGGG GGACCGGACC TCAAGGGGGT GACCGACAGG AGGTCCGAGG AGTGGCTCGA ATCGATCATC ATTGAGCCGG ACAAGCTGGC GGCGACCGAT CCGGCTCGGA AGGAGCTGAT CAAGAAATAC GGCTACGAGA TGCCAAAGCT CGGCATCGGC CATGACGACG CCATCAAGAT CATCACCTGG CTCAGGGGAG GGGGGGGCGG CGCCCAGACC GGGTCACCGC CGGCGGACGA ACATCCGGAA GTCGTGGTGA CGCCGGCGCT GGTTGCCAAG GGGAAAGCGT TTTTCACCGG GCAAAAGCCC CTGGCCAACG GGGGCGCGCC GTGCATCGCC TGCCACCGGA TCTCGACCCC GGGCATTACG GGAGGAAACC TCGCCGTCTC CAACCTGAGC GCCTCCTACC AGAAGATGGG GGAGAAGGGG ATGCGGGGGG CGCTCAAGGC CCTCAAGTTC CCGACCATGA AGAAGATCTA CGAAAACCGC CCCCTGACCG ATGACGAAGT AACGAGCCTG ATCGCCCTGT ACAAGGATGC CGCCCTCACT AAGAGCACAC CATCTGCGTC CTTCTTCCCC GCCTACGGCG CGGGGACTTT CGTCGTGTTC CTCGTCGGCT TGACTCTCTA CAAAAGGAGG ACCAGATAA
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Protein sequence | MARGILRAAV SRVCLVLVLS LAAHAYGDPG KDLFDKQCSG CHTVGGGDSG GPDLKGVTDR RSEEWLESII IEPDKLAATD PARKELIKKY GYEMPKLGIG HDDAIKIITW LRGGGGGAQT GSPPADEHPE VVVTPALVAK GKAFFTGQKP LANGGAPCIA CHRISTPGIT GGNLAVSNLS ASYQKMGEKG MRGALKALKF PTMKKIYENR PLTDDEVTSL IALYKDAALT KSTPSASFFP AYGAGTFVVF LVGLTLYKRR TR
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