Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0308 |
Symbol | |
ID | 3739595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 347521 |
End bp | 349224 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637777583 |
Product | succinate dehydrogenase subunit A |
Protein accession | YP_383278 |
Protein GI | 78221531 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.353372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCACA AATTCGACAT AGTCATCGTC GGGGCAGGGG GAGGAGGGCT GTTCGCCGCC CTGGAGGCGG TGCGCACCAA CCCGCGGGTT TCCGTGGCCG TCATCTCCAA GGTCTACCCG ACCCGCTCCC ATACCTCCGC GGCCCAGGGG GGGGTCAACG CGGCCCTGGG GAACAAGGAC CGGGACGACA CCGTGGATCT CCATGTCTTC GACACCGTCA AGGGGAGCGA CTACCTGGCG GACCAGGATG CCGTCGACTA CCTCTGCAGC CAGGCCCCGT CGGTGGTGCG GGAGCTGGAG AACCTGGGGG CGCCGTTTTC GCGATTCGCT GATGGCACCA TCGCCCAGCG CCCCTTCGGC GGGACCGTGA AGGACCGCTG CTGCTACTGC GCCGACAAGA CCGGCCATAC CCTCCTCCAC ACCCTGTTCG AGCAGTGCCT CCGCCGGGGG GTGACGTTCT TCAACGAATA TTTCCTCCTC TCCCTGGAGC ATGCCGACGG CGACTGCCAG GGGGTCATCA CCCTGAACAT GGCCACGAGC GCCATCGAGA CCTTTGTGGC CCCGGTGGTC ATCCTGGCCA CCGGCGGCCA CGCCAAGATG TACTGGAACC GCTCCAGCAA CGCGGCCGGC AACACCGGTG ACGGCCAGGC CGCGGCCCTG CGGGCCGGCA TTCCCCTGAA GGACATGGAG TTCATCCAGT TCCACCCGAC GGGCCTGCGC AAGAGCGGGC TCCTGGTGAC GGAAGGGGCG AGGGGCGAGG GGGGGTATCT CCTCAACCGC CACGGGGAGC GCTTCATGGT CCGCTATGCC CCCCAGAAGA TGGAGCTGGG TCCCCGGGAC CTGGTGGCCC GCTCCATGGA GACGGAGATC ATCGAGGGGA ACGGCTTCGA GAGCGATGCC GGGAGCTACA TCGAACTGGA TCTCCGCCAC CTGGGTGCCG AGGCCATCAA GAAGAAGCTC CCCCAGATCA GGGAACTCTC CATGCACTTC GAGGGGGTGG ACCCCATCGC GGAGCCGATC CCGGTCCGTC CCACGGCCCA CTACTCCATG GGGGGGATCG ACGCCCACAT GGCGAAGACC GCGGTCCGCG GCGTCTTTGC CGTGGGGGAG TGCGCCTGCG TCTCCGTGCA CGGGGCCAAC CGGCTGGGGG GAAACTCGCT CCTGGACATC CTGGTGTTCG GGAAACGAGC GGGACAGGAG GCGGCCGAGG AGGCCCCCCG GCGCAGGGCG CTGGGGATAC CCCCGGGCGC GGTTGCGGGG ATGGCCGACG AAATCAGGTC GTACGCCAAT CCTGAGCGCT ACGAGCGTTA CGGCATCATC AGGGAGGAGA TGGGAAAGGC CATGGGGGAC AACGTGGGGA TCTATCGGGT CGAAGAGAGG CTCCGCACGG GGGTGGAAGA GATCCTGGCC CTGCGGGAGC GCTTCCGGCG CATCCGGCTC TTCGACACGG GGACCGTCTA CAACACCAAC CTGATTCAGA TCCTGGAGCT CAAGAACATG CTCGACCTGG CCTCCTGCGT CGCCATCACC GCCCTGGCCC GGCAGGAGAG CAGGGGGTCC CATTACCGCG AGGACTTCCC CCGGCGTGAC GACGGAGCGT GGCACATCCA TTCCCTCTGC ACCATGGAGC GGGATGGCGA GGTCCGTCTC GGCCACAAGC CGGTCACCAT GGGGAAATAC TCCCTCGAGA CAAGGAGTTA CTAA
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Protein sequence | MEHKFDIVIV GAGGGGLFAA LEAVRTNPRV SVAVISKVYP TRSHTSAAQG GVNAALGNKD RDDTVDLHVF DTVKGSDYLA DQDAVDYLCS QAPSVVRELE NLGAPFSRFA DGTIAQRPFG GTVKDRCCYC ADKTGHTLLH TLFEQCLRRG VTFFNEYFLL SLEHADGDCQ GVITLNMATS AIETFVAPVV ILATGGHAKM YWNRSSNAAG NTGDGQAAAL RAGIPLKDME FIQFHPTGLR KSGLLVTEGA RGEGGYLLNR HGERFMVRYA PQKMELGPRD LVARSMETEI IEGNGFESDA GSYIELDLRH LGAEAIKKKL PQIRELSMHF EGVDPIAEPI PVRPTAHYSM GGIDAHMAKT AVRGVFAVGE CACVSVHGAN RLGGNSLLDI LVFGKRAGQE AAEEAPRRRA LGIPPGAVAG MADEIRSYAN PERYERYGII REEMGKAMGD NVGIYRVEER LRTGVEEILA LRERFRRIRL FDTGTVYNTN LIQILELKNM LDLASCVAIT ALARQESRGS HYREDFPRRD DGAWHIHSLC TMERDGEVRL GHKPVTMGKY SLETRSY
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