| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0286 |
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| Symbol | |
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| ID | 3738677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 317492 |
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| End bp | 319621 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637777561 |
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| Product | Rhs element Vgr protein:Gp5-like |
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| Protein accession | YP_383256 |
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| Protein GI | 78221509 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.856224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACATAC TCAACTTATT CAACAATTCT TCAAGTGCGA CATTTCTGTT CGAGGTTTCC
GGTTCTGCAG CCGATATGTC AGTCGTGAGT TTTACCGCTA ACGAGTGGAT GTCCTTGCCA
TACTCGGTAA GCGTTGCCTT TGCCACTCCA TACGGAATTG AATCCTTCGA CGACATAATC
GGTAGCGAAG CCCTGCTGAC AATTATCAAC AAAGACTTGC TTGCCGGAGG AGAGGATCGC
TACTTTCACG GGATTGTCAG ACGACTTGAG CGTATTGGCT CAAGTAGCAA CAATTATTGC
CTCTATGAAG CCGAGATCGT TCCGGCTGTT TTTCAGCTCT CCCTGCGCAA AAACTCCAGA
ATTTTCCAGA ACACTATGAC CCAGGACATC GTCAAACAGC TTCTGGAGGA AAGTGGTATC
ACCTCGGACA GATACCGCTT TGCCCTCCAA AACAAGGAGC GGTTGCGGAA ATTTTGCGTT
CAATACAGGG AGACGGATCT CGATTTTGTA ACTCGACTTC TCGAAGAAGA AGGGATGTTT
TACTTTTTCG AGCATTATTC CGATAAGCAT GTTCTTGTTA TAAGTGACAG CAGTGTTGTC
CACGTTCCAA TCAACGGTAA TCCTTCGATT ACCTTCAACT CAAACGGCGG CATGGTTGCT
GAGACAGAAA GCATCTATGG CTTTACCTCG TCCCAAAGGA TGACATCAGA GGTATTCGTT
CATCGGAACT TTAATTTCAA GAATCCTTCA GTTGACATGA CCGCGAAAGC ATCCGACTCG
CAGGAGTCAA AACGGGAAAT TTATGAGTAT CCCGCTCTCC ATGTTACGCA AGAGAGGGGT
AGCGCACTTG CCAGAGCCCA CAGGGAAGGA CTCAAGACAA TGCAGAAGCA GGGTCATGGC
CAGAGTTCGT CCTGTCGACT GACGCCAGGG TACAACTTTG CTCTCATTGG CCACGATTCA
GCGAGCCTGA ACATTGAATA TCTCATTGTG GACGTTTCTC ATTCGGGCAC TCAACCCCAG
TCGCTCGAGG AGATGTCCCA AGGGCCTTTC TCGTACGGCA ACAGTTTTAC TGTCATTCCG
GCAACAACCC CGTTCCGCCC CACTGCCACT CGACAAAAGC CCATAGTAAA AGGGATTCAG
ACCGCTATCG TGGTTGGTCC CAAGGGCGAA GAGATCTACG CCGATGAGTA TGGTCGGATA
AAGGTTCAGT TCCATTGGGA CAGGGAAGGC CGCCGTGACG AGAAGAGTTC CTGCTGGCTC
CGCATAGGGC AGACTTGGAG TGGAAACGGT TGGGGCATGA TTAACATCCC CCGGATTGGA
GACGAGGTAC TGGTCGACTT TATCGATGGA GATCCGGATC GTCCCATTAT CGTCGGCAGC
GTCAACAACG CCGAATCTCC CGCACTCTTT TCCCTCCCCG CCAACAAAAC CCAAAGCGGC
ATCCGTACCC GCAGCTATCC CAACGGCGGC CGCGACAACT ACCACGAACT TCGCTTCGAA
GACAAAAAGG GTAGCGAGGA GATCTACCTT CAGAGTGAGA AGGACTGGAA CATCCTGGTT
AAGAACGACA AGACCCAGAA TGTTGAACAC GACGAGGCTC TACATGTGGC AAACAACCGG
CTGAAGACCG TCGGAGTTGA CCAGATGGTG CAGGTGGGAG CCAACCACAC CGAAATCATC
GGTGCCAATA AGAGTATTTC CGTCGGCTCA AACAAGACCG AGACGGTGGG GCTCAACTCT
GCGGAAACGG TTGGGCTTGC CAAGGAGCTG ACCATCGGCG GACTTTATCA GGTCAGCGTC
GGTGGGGTCA TGAACGAGAC CGTCATCGGC GCCAAGGCCG AGGAAGTGGG GGTGACCAAG
GCGGTGCTGG TCGGCGCTCA CATGACCGAG AAGGTGGCCG GGAACCGCTC GCTCACCGTG
GGGCAGAACC TCTCGGCAAC GGTCAGCCAG AACACCACCG TGAAGGCCAA GGCGATAGTT
CTGGAAGCCG ATGACGAGAT CATCTTCAAG ACGGGCAGCT CTACCATCTC CCTGAAATCC
AGCGGCGAGA TTGTCGTTAC GGGAGCGACC ATAACCGAGA AAGCCAGCGG TGAAATCGTT
ATAAAGGGTG CCAGGACTTC GGTGAATTGA
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| Protein sequence | MDILNLFNNS SSATFLFEVS GSAADMSVVS FTANEWMSLP YSVSVAFATP YGIESFDDII
GSEALLTIIN KDLLAGGEDR YFHGIVRRLE RIGSSSNNYC LYEAEIVPAV FQLSLRKNSR
IFQNTMTQDI VKQLLEESGI TSDRYRFALQ NKERLRKFCV QYRETDLDFV TRLLEEEGMF
YFFEHYSDKH VLVISDSSVV HVPINGNPSI TFNSNGGMVA ETESIYGFTS SQRMTSEVFV
HRNFNFKNPS VDMTAKASDS QESKREIYEY PALHVTQERG SALARAHREG LKTMQKQGHG
QSSSCRLTPG YNFALIGHDS ASLNIEYLIV DVSHSGTQPQ SLEEMSQGPF SYGNSFTVIP
ATTPFRPTAT RQKPIVKGIQ TAIVVGPKGE EIYADEYGRI KVQFHWDREG RRDEKSSCWL
RIGQTWSGNG WGMINIPRIG DEVLVDFIDG DPDRPIIVGS VNNAESPALF SLPANKTQSG
IRTRSYPNGG RDNYHELRFE DKKGSEEIYL QSEKDWNILV KNDKTQNVEH DEALHVANNR
LKTVGVDQMV QVGANHTEII GANKSISVGS NKTETVGLNS AETVGLAKEL TIGGLYQVSV
GGVMNETVIG AKAEEVGVTK AVLVGAHMTE KVAGNRSLTV GQNLSATVSQ NTTVKAKAIV
LEADDEIIFK TGSSTISLKS SGEIVVTGAT ITEKASGEIV IKGARTSVN
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