| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0252 |
|---|
| Symbol | |
|---|
| ID | 3739715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 282442 |
|---|
| End bp | 283350 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637777527 |
|---|
| Product | cytochrome c oxidase, subunit II |
|---|
| Protein accession | YP_383222 |
|---|
| Protein GI | 78221475 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.433496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.0258846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACCCGA ACCTCTACAC CACAACCCGA GCCGTGGACC CCGTTTTCAT CTGGATCTTC
GGGGTCAGCC TGGTGCTTCT CCTGGGGATC ACCGCCACCA TGGTGGGATT CGTCATCCGC
TACCGCCGCT CCCGGGCCCC GGAACCCACT TCCCAGGCGG CAAGCAACAT CTGGCTTGAG
ATAATCTGGA CAGCCCTCCC CACCATCATC GTCATGGCGA TGTTCTACTA CGGCTGGGCC
GGCTACCTGA CGCTCCGCAA TGTGCCGAAG GACGCCCTGG AGGTGACGGC CACGGCCCGC
ATGTGGTCCT GGAGCTTCAC CTACGCCAAC GGCAAGACCA GCCCGACGCT CTATGTGCCG
GTCGGAAAGC CGGTGCTGGT GCATCTCGTC TCCGAGGATG TGATCCACGG CTTCTATGTC
CCCGCGTTCC GGGTCAAGCA CGACGTGGTG CCGGGAATGA AGAACCATGT CTGGTTCGTG
GCGGACAAAC CCGGCACCTA CGATCTTTTC TGTTCCGTCT ACTGCGGCCT CGGCCATTCC
GGTATGGTTT CCACGGTGGT GGCCGTTCCC GAGGCGGAGT TCCAGGCATG GCTCGCGAAG
GCGGAGAAAG AGGAGAACCA AGGAGGGGGG AGGGCGCTCC TGGAGAAGAA CGGCTGCCTC
GGCTGCCATT CCCTGGACGG GTCGCGAAAG GTGGGGCCAA GCTTCAAGGG GATCTGGGGG
CGGAACGTGA CGGTTATGAC CGGTGGCGCC GAGCGGACCA TCACCGTGGA CGAGGAGTAC
GTGAAACGCT CGATCCGCGA GCCGGGGGCC GATGTGGTCA AGGGATACCC GCCAGTCATG
CCCCCCTATT CAGCCCTCTC CGATAAGGAT ATCGAGGAAA TTATGGATTT CCTGAAGGAT
CTCAAATGA
|
|---|
| Protein sequence | MDPNLYTTTR AVDPVFIWIF GVSLVLLLGI TATMVGFVIR YRRSRAPEPT SQAASNIWLE
IIWTALPTII VMAMFYYGWA GYLTLRNVPK DALEVTATAR MWSWSFTYAN GKTSPTLYVP
VGKPVLVHLV SEDVIHGFYV PAFRVKHDVV PGMKNHVWFV ADKPGTYDLF CSVYCGLGHS
GMVSTVVAVP EAEFQAWLAK AEKEENQGGG RALLEKNGCL GCHSLDGSRK VGPSFKGIWG
RNVTVMTGGA ERTITVDEEY VKRSIREPGA DVVKGYPPVM PPYSALSDKD IEEIMDFLKD
LK
|
|---|
| |