Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0246 |
Symbol | |
ID | 3739709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 276713 |
End bp | 277699 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637777521 |
Product | serine/threonine protein kinase |
Protein accession | YP_383216 |
Protein GI | 78221469 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000015453 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.000046436 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCCACC GCACCCACCC CTTCAGCACC CTTACCCCCG CCTTCATCAT GGATGCCGTG GAGAGCCAGG GGTTCGCCTG CGATTGCCGC ACCCTGGCCC TGAACAGCTA CGAGAACCGG GTCTATCAGG TGGGGATCGA GGAGGGGGAA CCCCTCGTGG CCAAGTTCTA CCGCCCCGGT CGCTGGACCG ACGAGCAGAT CGTGGAGGAG CACGAGTTCT GCGCCGAACT GGCGGGCCAC GAGCTTCCCG TGGTGGCCCC CTGGCGCAAC GCCGCCGGCC ACACACTCTT CCACCACGGC GGGTTCCGCT TCGCCCTCTA TCCCCGCCAG GGGGGACGGG CGCCGGAGTT CGACAACCTG GACAACCTCC TGGTCCTCGG GCGGATGCTG GGGCGGATGC ACCGCATCGG CGCCGTTACT CCCTTCGCCC ACCGTCCCAC CCTGGACAGC CAGAGCTTCG GCCGCGAAAG CGTGGCCCTG ATCCGGGACC GCTTCATTCC CCCCGACCTG CGGGAGAGCT ACGCGGCCGT GACCGGCATG CTCCTGGAGA CGGTCGACGC CACCTTCGCC GAGATGGGGG CGGTCCGGTA CCTGCGGACC CACGGCGACT GCCACGCCGG GAACATCCTC TGGCGCGGCG ACGCCCCTCA CTTCGTGGAC TTCGACGACG CCCGCATGGC GCCGGCCGTG CAGGACCTCT GGATGATGCT CTCCGGCGAC CGCCCTCGAA AGCTCGCCCA ACTGGATTCT CTGCTGGAGG GGTACACGGA GTTCAACGAG TTCGACTCCC GGGAACTCAG GCTCATCGAG CCCCTGCGGG CCCTGCGGGT TCTCCACTAC AGCGCCTGGC TCGCCCGCCG CTGGGAAGAC CCCATCTTTC CCGCCACCTT CCCCTGGTTC AACACCCCCC GCTACTGGAA CGACCAGATC ATCGAGCTGC GGGAGCAGGT TGCGGCCCTG ACGGAGCCCC CCCTGGAGCT TCCCTGA
|
Protein sequence | MPHRTHPFST LTPAFIMDAV ESQGFACDCR TLALNSYENR VYQVGIEEGE PLVAKFYRPG RWTDEQIVEE HEFCAELAGH ELPVVAPWRN AAGHTLFHHG GFRFALYPRQ GGRAPEFDNL DNLLVLGRML GRMHRIGAVT PFAHRPTLDS QSFGRESVAL IRDRFIPPDL RESYAAVTGM LLETVDATFA EMGAVRYLRT HGDCHAGNIL WRGDAPHFVD FDDARMAPAV QDLWMMLSGD RPRKLAQLDS LLEGYTEFNE FDSRELRLIE PLRALRVLHY SAWLARRWED PIFPATFPWF NTPRYWNDQI IELREQVAAL TEPPLELP
|
| |