Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0219 |
Symbol | |
ID | 3739430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 250957 |
End bp | 252276 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637777495 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_383190 |
Protein GI | 78221443 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000279526 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 6.0222499999999995e-21 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAATGA CTTCTTTTGG TCCGACCGGA CTCGACGCAA CGCTTATCCC GAAGATCGCC GGGGAATGGG GAACCCCTAT TTACCTCCAC GATCAGCAGT ACATCGAGAA CAGCTGCGAC CAGCTGCTTG CCATGCCCAA TGCCTACGGC CTGCACGTCC GCTACGCCAT CAAGGCCAAC TCTGACCGCA CCGTCCTGCG CATTGTCACC GGCAAGGGGC TGGACCTGGA CTGCTCATCC CTGGACGAGG CCGCCCGGGC CCATGCCGCC GGCATCCCCT ACAGCCGCAT GATGCTCACC ACCCAGGAGG TCCCCACCGG CGAGGAGCGG ACCGAACTGG AAGCCATGAT CAAGGTCGGC CTCAAGTACA ATGTCTGCTC CACGCTGCAG TACCAGCTCA TCGCCGACTT TGCCGCCCAG AACAAGATCG ACCTTTCCAT GAGGGTCCAT CCGGGCGCCG CCGGCGGCGG CGAGAGCGCC ACCCGCGACA CCGGCAGCGA GTACTCCTGC TTCGGCGTCC ACCTGCGCGA CGTCCCGACC GTGAAGGCCC TGGCCGACGA GAAAGGGCTC CGCTTCACCC AGGTCCACGT CCATATCGGC TCCGGCGGCG CCCCGGAGAA GTGGCAAGAG AACATCGACC GGGAGCTCGG CTTCATCAAA ACCTACTTCC CGGATGCAGT CACCGTCAGC TTCGGCGGCG GCCTCAAGGT GGCCCGCATG CCGGGCGAGA AGCAGGCCGA CATCGCCACC CTGGGAGCCT ATGCAAAGCA GCGGATCGAA GAGTTCAAGG CCGCCACCGG CCGCGAACTG ATGATGGAGA TCGAGCCGGG GACCTTTGTG GTGGCCAACT CGGGGCACAT CGTCACTCGC ATCATCGACA AGAAGTTCAC CAACGAGATG AACTTCCTCA TCGTCGACGG CGGCATGGAG CTACTGACCC GGCCGCTCCT CTACGGCTCC GAGCATCCCA TCGCCATCGT CCGCCAGGAC GGGACGCTCC TCTCCAGCGA GTACGACCAG ACCCCCACGG CGGGGCTGAA GCCCTTCGGC ATCGTCGGCC GCTGCTGCGA AAGCGGCGAC TCGGTCCGCC TGGACAAGGA GGGGAACATC GTGCCGGTCA TGATCGTTGA GCCGGAGATC GGCGACTACG TCGTCATCGG CGGCACCGGC GCCTACTCCG AGAGCATGTC GCCGGAGAAC TACAACTCCC ACCGCAAGCC GGGAGCCGTC ATGAGGACCA AAACCGGCGA ACTGGTGCTC ATCCGGAAGA AGCAGGTACG GGAGCAACTG ACCCAGAACG AACTGGACGT GACGCTGTAA
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Protein sequence | MTMTSFGPTG LDATLIPKIA GEWGTPIYLH DQQYIENSCD QLLAMPNAYG LHVRYAIKAN SDRTVLRIVT GKGLDLDCSS LDEAARAHAA GIPYSRMMLT TQEVPTGEER TELEAMIKVG LKYNVCSTLQ YQLIADFAAQ NKIDLSMRVH PGAAGGGESA TRDTGSEYSC FGVHLRDVPT VKALADEKGL RFTQVHVHIG SGGAPEKWQE NIDRELGFIK TYFPDAVTVS FGGGLKVARM PGEKQADIAT LGAYAKQRIE EFKAATGREL MMEIEPGTFV VANSGHIVTR IIDKKFTNEM NFLIVDGGME LLTRPLLYGS EHPIAIVRQD GTLLSSEYDQ TPTAGLKPFG IVGRCCESGD SVRLDKEGNI VPVMIVEPEI GDYVVIGGTG AYSESMSPEN YNSHRKPGAV MRTKTGELVL IRKKQVREQL TQNELDVTL
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