| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0213 |
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| Symbol | |
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| ID | 3739675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 246743 |
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| End bp | 247975 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637777489 |
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| Product | L,L-diaminopimelate aminotransferase |
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| Protein accession | YP_383184 |
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| Protein GI | 78221437 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0427359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000000000342652 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAAAA TCAACGACAA CTACCTGAAA CTGAAGGCCG GCTACCTCTT TCCCGAGATC
GGCCGCCGCG TGCGGGAGTT TTCCGCCGCC AACCCCGAGG CCAAGGTCAT CCGGCTCGGC
ATCGGCGACG TGACCCGCCC CCTGGCCCCG GCCATCATCA AGGCGTTCCA CGACGCCGTG
GACGATCTGG CCACCATCGA CAACTTCGCC GGCTATGGCC CGGAGCAGGG GTACGACTGG
CTCATCAACG CCATCATCGA GAAGTCCTAC AAGCCCCTGG GCGTTTCCCT CAAGACCGAG
GAGATGTTCA TCTCCGACGG CTCCAAGTGC GACTGCGCCA ACATCCTCGA CATCTTCGCC
CTCGACAACG TCGTTGCCAT CGGCGATCCG GTCTACCCGG TCTACAACGA CACCAACGTC
ATGATCGGCC GCACCGGCGA TGCCGACGAG AAGGGGTACT ACAAGGGGAT CGTCTACATG
CCCTGCACCG AGGCGAACGG CTTCATCCCG TCGCTCCCCA CGGAAAAAGT GGACATCATC
TACCTCTGCT TCCCCAATAA TCCCACCGGC ACCGTGGCCA CCAAGGCCGA GCTGAAAAAG
TGGGTCGACT ACGCCAACGC CAACGATGCC GTCATCTTCT TCGACGCCGC CTATGAGGCC
TTCATCACCG ATCCCGCAAT CCCACACTCC ATCTACGAGA TCGAAGGGGC CAAGAAGTGC
GCCATCGAAT TCCGCTCCTT CTCCAAGACC GCCGGTTTCA CCGGTGTCCG CTGCGGCCTC
GTGGTCGTTC CGGAAGAGGT GATGGGCACC ACGCCGACGG GGGAGAAGTA CAGCTTCAAC
AAGCTCTGGC TCCGCCGCAC CACCACCAAG TTCAACGGCG CCTCCTACCC GGTCCAGAAG
GCCGCCGCCG CCGTCTACTC CGACGAGGGA TGGAAGCAGA ACAAAGAGAT CATCGACTAC
TACATGGAGA ACGCCCGGAT CATCCGCGAA GGCCTCGCCG CCGCCGGCCT TACAGTCTAC
GGCGGGGTCA ACGCCCCCTA CATCTGGCTG AAAACGCCGG GCGGCATGAG CAGCTGGGAC
TTCTTCGACA AACTTCTCAC TGAGTGCAAC GTCGTGGGGA CGCCGGGAAG CGGCTTCGGC
CCCAGCGGCG AAGGGTTCTT CCGGCTCTCG GCCTTCGGCC ATCGCGAGAA TGTGATTGAG
GCGGTGGAGA GGATAAAGAA GAATCTGAAG TAG
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| Protein sequence | MAKINDNYLK LKAGYLFPEI GRRVREFSAA NPEAKVIRLG IGDVTRPLAP AIIKAFHDAV
DDLATIDNFA GYGPEQGYDW LINAIIEKSY KPLGVSLKTE EMFISDGSKC DCANILDIFA
LDNVVAIGDP VYPVYNDTNV MIGRTGDADE KGYYKGIVYM PCTEANGFIP SLPTEKVDII
YLCFPNNPTG TVATKAELKK WVDYANANDA VIFFDAAYEA FITDPAIPHS IYEIEGAKKC
AIEFRSFSKT AGFTGVRCGL VVVPEEVMGT TPTGEKYSFN KLWLRRTTTK FNGASYPVQK
AAAAVYSDEG WKQNKEIIDY YMENARIIRE GLAAAGLTVY GGVNAPYIWL KTPGGMSSWD
FFDKLLTECN VVGTPGSGFG PSGEGFFRLS AFGHRENVIE AVERIKKNLK
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