Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0110 |
Symbol | |
ID | 3738889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 137064 |
End bp | 137792 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637777389 |
Product | nucleic acid binding, OB-fold, tRNA/helicase-type |
Protein accession | YP_383084 |
Protein GI | 78221337 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0000245323 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAG CACTCAGCAT CTCAGCCCTC GCGCTTGCCC TTTCGCTCCC CCTCGGTGCC CACGCCTTCG GTCCCGGCGC GTCCTCCATG GGAGGGGCCA CCGCCCCGGC AGGCGTTCCC CTGGCGGGGA AGGTTGCGGA AACCATGGCG AGCGGCGGGT ACACCTACCT TCTCCTGGAG CGGGACGGGA AGAAGACGTG GGCGGCCATC CCCGAAACCC CCGTGGAGGT GGGCCGAGAG ATTACCCTCA AGCCGGGGAT GGAGATGAAG AACTTCGCCA GTAAAGCCCT CAAGCGCACC TTCGAGAGCA TCTATTTCTC AGAGGGTCTC GCATCGGCTG TGGAAAGCAC GGCGGGTAAG AGCTCTCCGG GGAGCAAGGG GGTCGTGGTA GCCCCGGCCG AACAGGTGAA GGTTGAGAAA GCTGCCAGCC CCAACGCCCA CACTATCGCC GAGACCTACG AGCAGAGGGG GAGCCTCGAC GGAAAACCCG TGGCCGTGCG GGGGAAGGTC ATGAGGGTGT CCGCGGGCAT CATGGGGAAA AACTGGGTCC ACCTCCAGGA CGGTAGCGGC GATGCCAAGA AGGGAACCAA CGACCTGACC GTCACCACCC AGGATCTTCC GGCCGTGGGT GACGTGGTGA CCGCCACCGG CACCCTCCGC AAGGACAAGG ATTTCGGCGG CGGCTACCGG TATCAGGTCA TCATCGAGGA AGGGACCGTG AAGCGCTGA
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Protein sequence | MNKALSISAL ALALSLPLGA HAFGPGASSM GGATAPAGVP LAGKVAETMA SGGYTYLLLE RDGKKTWAAI PETPVEVGRE ITLKPGMEMK NFASKALKRT FESIYFSEGL ASAVESTAGK SSPGSKGVVV APAEQVKVEK AASPNAHTIA ETYEQRGSLD GKPVAVRGKV MRVSAGIMGK NWVHLQDGSG DAKKGTNDLT VTTQDLPAVG DVVTATGTLR KDKDFGGGYR YQVIIEEGTV KR
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