Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0109 |
Symbol | |
ID | 3738888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 135784 |
End bp | 137049 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637777388 |
Product | peptidase M48, Ste24p |
Protein accession | YP_383083 |
Protein GI | 78221336 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000135832 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG TCATCATCCT TTTCTACCTC ATTACCCTTG GCGCCGGCTT TTTCCTTCGG ACGCTGAATC TCCGCCATCT GAAACGGTAC GGCTCCACCG TCCCCTCCGG TTTCGAGGGG GCGGTGGAGC CGGAAACCCT CCGCAAAACG GTTGCCTATA CCCTTGACCA GAGCCGCCTG GGGCTCGCCG AGTCCCTCTT CGACGCGGCG CTCCTCCTCA TTTTTCTCTT CGGGCTTCTG CCGGCCTATG ACCGGTGGCT CGCCTCCCTG GGAGGCTCCT TCGTCCTCTC GGGTGTCCTC TTCTTCCTGG GTCTCACCCT CATCCAGACG TTCCTCGGCA TCCCCTTCGA CCTTTACGGG ACCTTTCGCC TCGAAGTCCG CTACGGCTTC AACACCACGA CTCCCGGCCT CTGGCTCTCG GACCTGGCAA AGTCGACCCT CATCGCGGTG GTGCTGACCG GGCTCCTGGT GGCCGGGGCC TTTGCCCTCG TGGCGTGGAG TCCCCGCTTC TGGTGGCTCT GGGTCTGGGG GTTCTTCGCC ATGGTCTCCC TCTTCCTCAT GTACCTCTCC CCCTACGTCA TCGAACCCCT CTTCAACCGG TTCGAGCCGG TCGCCGAGGA GGGGCTGGAG GAGGAGATCC GCGCCTTGTG TGAACGGGCC GGGCTGCGGG TCAGCCGGGT CATGCAGGTG GACGCCTCCC GGCGCAGCCG CCACTCCAAT GCCTACTTCA CCGGCATCGG CCGGGTAAAG CGTATCGTCC TTTACGACAC CCTCATCCGC CAGATGAGCC ACCGGGAGAT CCTGGCGGTC CTTGCCCACG AGATCGGCCA CTGGAAGAAG GGGCATATCC GCCGGCGGTT GATCCTCACG GAAGCCGGTG CCCTGGCCGG CTCGTGGTTT GCCTGGAAAC TCACGGGATG GGAGGGATTT CCGGGGCTCA TCGGCCTGAC GGACGCCTCC TTCGCGGCGC GACTCGTCAT CCTCGGTTTC CTGGGCTCCA TCGTTTCCTT CCCCTTCACC CCCCTTTCCA GTTGGCTCTC CCGCCGCCAC GAGCGGGAGG CGGACCGTTT CGCCACCGAC ATTACGGGGG ATGCGGAGGC CTTGGCCTCA GCCCTCGTGA AGCTCTCCAC GGAGAATCTC TCCAATCTCC ACCCTCATCC CCTTTATGCG GCGTTCTACT ATTCCCATCC TCCCGTGGTT GAGCGGGTGG GCAGGCTGAG GGCCGCCATG CCTCCGGCAG GAAAAGCGGG AGAGACCACG ATGTAA
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Protein sequence | MTAVIILFYL ITLGAGFFLR TLNLRHLKRY GSTVPSGFEG AVEPETLRKT VAYTLDQSRL GLAESLFDAA LLLIFLFGLL PAYDRWLASL GGSFVLSGVL FFLGLTLIQT FLGIPFDLYG TFRLEVRYGF NTTTPGLWLS DLAKSTLIAV VLTGLLVAGA FALVAWSPRF WWLWVWGFFA MVSLFLMYLS PYVIEPLFNR FEPVAEEGLE EEIRALCERA GLRVSRVMQV DASRRSRHSN AYFTGIGRVK RIVLYDTLIR QMSHREILAV LAHEIGHWKK GHIRRRLILT EAGALAGSWF AWKLTGWEGF PGLIGLTDAS FAARLVILGF LGSIVSFPFT PLSSWLSRRH EREADRFATD ITGDAEALAS ALVKLSTENL SNLHPHPLYA AFYYSHPPVV ERVGRLRAAM PPAGKAGETT M
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