Gene Gmet_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0107 
Symbol 
ID3738886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp133443 
End bp134615 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content63% 
IMG OID637777386 
Producthypothetical protein 
Protein accessionYP_383081 
Protein GI78221334 
COG category[S] Function unknown 
COG ID[COG3825] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.183182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTGG CTCTCTACCA CTCACTGCGG GCGCTCAAGG TGCCGGTGAG CCTCACCGAG 
TGGCTTACCC TGCTGGAGGG GCTTGCCAAT GGGCTCCACA ACCAGAGCCT CGAGGACTTC
TATTACCTCT CCCGCAGCCT CCTCGTGAAG GACGTCGCCC ACTACGACGC CTTTGACCAG
GCTTTCGCCT ACTGCTTCAA GGATGCACCG ATACCCGAAG ATCTTGCCAC CAGGAAGAAG
GTCCTGGAAT GGCTCCGGGA TGCGCAGGCT CCGCGGCGTC TTTCAGAGGA AGAGCTGGCC
CGCCTGGAAG CGCTTTCCCT GGACGAACTG CTGCGGCAGC TGGAAGAGCG GCTGCGTACC
CAGGACGGTG CCCACCACGG CGGGAAAAAG TGGATCGGCA CCGGTGGGAC GAGCCCCTTC
GGCGCCGGCG GCAACCACCC CTCCGGGATA TCCTTCGCTG CCGAGGGGGG CGGGGGAAGG
GCCGTGCTCC AGGCCTTTGG CCGGCGCTAC CGCAACCTGC GCAATGATCT GACCCTGGAT
GTGCGCCAGA TCGGCGTGGC ACTGAAGCGT CTGCGCGATC TGAGGGAATG CGGTGCCGAG
GAACATCTCG ACCTTGAGGG CACCATCGAC AGGACCTGCA GGAACGCCGG GGAGATCGAT
CTGGTCTTTG CCCGCGAGCG GGAGAACCAG GTGCGCGTTC TGCTGATTAT GGACTCGGGT
GGTTCCATGG AGCCGTTCAG GGCCCTGTCG GAGCGGCTCT TTTCCGCGGC CCACGGACTC
AACCATTTCA GGGATTTCCG CGCATTCTAC TTCCATAACT GCGTCTACGA GGACCTCTAT
GTCGACCTCG ATTCCGACGA ATCCATCCCC ACGGCCGAGG TGATCAGGGA GTACGGAAAG
GAGTATCGAC TCATCTTCGT GGGCGACGGG GCCATGGCCC CCTACGAACT GATGAGCCCT
TCCGGCATTC TGGAGCGGTA TCGTGCCGGC ACCATGTCCG GCCTGGACTG GCTCCGCCAG
CTTGCCGACG CCTTCGGCCG GCGGGCCTGG ATGAACCCGC TTCCCGAGAA TTCCTGGATG
CACTACGAGA CCGTCCCCGT GGTAGGAGGT CTCTTTCCCA TGTTCCCCCT CACGCTGGAA
GGGCTCACGC GGGCAGTGCG GCACTTGCGG TAG
 
Protein sequence
MFLALYHSLR ALKVPVSLTE WLTLLEGLAN GLHNQSLEDF YYLSRSLLVK DVAHYDAFDQ 
AFAYCFKDAP IPEDLATRKK VLEWLRDAQA PRRLSEEELA RLEALSLDEL LRQLEERLRT
QDGAHHGGKK WIGTGGTSPF GAGGNHPSGI SFAAEGGGGR AVLQAFGRRY RNLRNDLTLD
VRQIGVALKR LRDLRECGAE EHLDLEGTID RTCRNAGEID LVFARERENQ VRVLLIMDSG
GSMEPFRALS ERLFSAAHGL NHFRDFRAFY FHNCVYEDLY VDLDSDESIP TAEVIREYGK
EYRLIFVGDG AMAPYELMSP SGILERYRAG TMSGLDWLRQ LADAFGRRAW MNPLPENSWM
HYETVPVVGG LFPMFPLTLE GLTRAVRHLR