Gene Gmet_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0101 
Symbol 
ID3738880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp125888 
End bp127762 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content64% 
IMG OID637777380 
Productradical SAM family protein 
Protein accessionYP_383075 
Protein GI78221328 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00410532 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.882418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTCG TCCTTGCCGC CATCCACCCA GTTCCCTCTC CCCAGGCCGT CCCTCTCGCC 
AACGCGTTCC TGAAGGCATA CCTCGGCACC GACGAGGAGC TTGCCGCCCG CGTTGCTGTC
ACGCTCTGCG ATTTTTTGCG TTCAACGCCA GCCGACGTCT GTGCTGCCGA GATTCTTGCC
CACGAGCCCG ATGCGGTCGG CTTTTCCCTC TATCTCTGGA ACACCGAGGA GTCGGGGCGG
ATTGCGGCGG AGCTTCGGCG GAACCGTCCC GGCATCACCA TCTTCGCCGG CGGCCCCCAG
GCAACCGCAG ACCCCCTCGG AACGCTCACC GGGGGGGGGT ACGATTTTCT CATCCTCGGC
GAGGGGGAGG TGCCGTTTCT CGAGGTGACG GCCCGGCTTG CCGACGGGCG TCCTTTCCGT
GGCGCGCCGG GGACGGCCTG GCTTGACGAT GGAAAACTGG CAAGCCGGCC CCAGAAGCCG
GTGGCGCTCC TTGACACCAT TCCGTCCCCC TTTTTGTCGG GAATCATCGA GCCCGGGCGC
TACGGGGGGC TTCTCTGGCA ACTCTCCCGC GGGTGCGACT TCGCCTGCGA GTACTGCTTC
GACTACAAGG GGACCAAGGG GGTGCGGCGG TTCTCTCTGG AGCGGGTCGA CGCGGAGCTC
GATTTTCTCG TCCGCCACAA CGTCCCCCAG GTGTTTGTCC TCGACTCCAC CTTCAACGTC
GATGCGAAGC GGGCCAAGAC GATCCTGCGG ATGATCCGCA AGCGCGCCCC CCATATCCAC
TTCCACTTCG AGGTGCGGAG CGAGTTTCTG GACCGGGAGA TGGCCCGGCT TTTTGCCGGC
ATTACCTGCT CTCTCCAGAT CGGCCTCCAG AGTGCCGACC CGGCCATCCT CAAGGGGATA
CGGCGGCATT TCGATCCGGA CGACTTTCGA AAACGAGTCG CGCTTCTCAA CGAAAGCGGG
GCCGTCTTCG GCTTTGATCT CATCTACGGA CTCCCCGGCG ACTCCCTCGC AGGCTTCAGG
CAATCCCTCG ACTTCGCCCT CGCCCTCTAC CCGAACCATC TGGACATCTT CCCCCTTGCC
GTTCTCCCCG GCACCCCCCT TGCCGCCCGC GCGGCTCAGG CAGGGCTCGA CCACCTTCCG
GCGCCCCCCT ACGCGCTTAC CGCCACCCCG ACGTTTCCGG CCCCGGACAT GAAACGTGCC
GCCCGCCTTG CCGGAGCCTG CGACATCTTC TATAGCCGGG GAAAAGCGGT CGCCTGGTTC
AACGGCGTCA TTGCCCCCCT TTCCCTGACG CCGGCAGAGT TTCTCGACGC CTTCGGCGGA
TGGCTCGCAC GCCAAGGGAT TGAAGCCCGG GAGGAGGCCT TGGGCGACGA GGCGATCTGG
TCGCTGCAGC GCTCGTTTCT TGCCCACATC TTTGCCGACC GGCGGGTGCG TCGTCTTCTC
CCCGTGGCTC TCGACCTGGT CGATTATCAC TATCATTACG CGGCGGCGCT TCTGGCGCCG
CCGCCGGAGC TTCCCACCGA CCGCAGCCTC GCCGGCTTGA ATATTCTCGA TCAGGTAGTG
TGTCTTGCTC CATCCACGAG GCTTGCCCGC TTCTCCTATG AAATCACCGA TCTGCTGGAA
GCGGGCAACG CAGACCTTCG GGAAATCTGT GCATGTTTCT CGCCCAGTCC GTCATGGGCC
GTCATTTATC CCCGCGGCAA CGACATATTT ACCGAATCTC TCCTGGAGTC CTATTTCCTT
CTTCTCGAGG GGCTCGACGG CTGCTGCCGG GCCGGTGATG TCGTTGCGCG ACTCGCCCTT
TCCGGAGAGG GGGCAGCGGA ATTCCTCAAA TTTGCCGCCG CGGAGGGGAT TGTCACGGTA
CGGAACTGCC CCTGA
 
Protein sequence
MKVVLAAIHP VPSPQAVPLA NAFLKAYLGT DEELAARVAV TLCDFLRSTP ADVCAAEILA 
HEPDAVGFSL YLWNTEESGR IAAELRRNRP GITIFAGGPQ ATADPLGTLT GGGYDFLILG
EGEVPFLEVT ARLADGRPFR GAPGTAWLDD GKLASRPQKP VALLDTIPSP FLSGIIEPGR
YGGLLWQLSR GCDFACEYCF DYKGTKGVRR FSLERVDAEL DFLVRHNVPQ VFVLDSTFNV
DAKRAKTILR MIRKRAPHIH FHFEVRSEFL DREMARLFAG ITCSLQIGLQ SADPAILKGI
RRHFDPDDFR KRVALLNESG AVFGFDLIYG LPGDSLAGFR QSLDFALALY PNHLDIFPLA
VLPGTPLAAR AAQAGLDHLP APPYALTATP TFPAPDMKRA ARLAGACDIF YSRGKAVAWF
NGVIAPLSLT PAEFLDAFGG WLARQGIEAR EEALGDEAIW SLQRSFLAHI FADRRVRRLL
PVALDLVDYH YHYAAALLAP PPELPTDRSL AGLNILDQVV CLAPSTRLAR FSYEITDLLE
AGNADLREIC ACFSPSPSWA VIYPRGNDIF TESLLESYFL LLEGLDGCCR AGDVVARLAL
SGEGAAEFLK FAAAEGIVTV RNCP