Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0101 |
Symbol | |
ID | 3738880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 125888 |
End bp | 127762 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637777380 |
Product | radical SAM family protein |
Protein accession | YP_383075 |
Protein GI | 78221328 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00410532 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.882418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGTCG TCCTTGCCGC CATCCACCCA GTTCCCTCTC CCCAGGCCGT CCCTCTCGCC AACGCGTTCC TGAAGGCATA CCTCGGCACC GACGAGGAGC TTGCCGCCCG CGTTGCTGTC ACGCTCTGCG ATTTTTTGCG TTCAACGCCA GCCGACGTCT GTGCTGCCGA GATTCTTGCC CACGAGCCCG ATGCGGTCGG CTTTTCCCTC TATCTCTGGA ACACCGAGGA GTCGGGGCGG ATTGCGGCGG AGCTTCGGCG GAACCGTCCC GGCATCACCA TCTTCGCCGG CGGCCCCCAG GCAACCGCAG ACCCCCTCGG AACGCTCACC GGGGGGGGGT ACGATTTTCT CATCCTCGGC GAGGGGGAGG TGCCGTTTCT CGAGGTGACG GCCCGGCTTG CCGACGGGCG TCCTTTCCGT GGCGCGCCGG GGACGGCCTG GCTTGACGAT GGAAAACTGG CAAGCCGGCC CCAGAAGCCG GTGGCGCTCC TTGACACCAT TCCGTCCCCC TTTTTGTCGG GAATCATCGA GCCCGGGCGC TACGGGGGGC TTCTCTGGCA ACTCTCCCGC GGGTGCGACT TCGCCTGCGA GTACTGCTTC GACTACAAGG GGACCAAGGG GGTGCGGCGG TTCTCTCTGG AGCGGGTCGA CGCGGAGCTC GATTTTCTCG TCCGCCACAA CGTCCCCCAG GTGTTTGTCC TCGACTCCAC CTTCAACGTC GATGCGAAGC GGGCCAAGAC GATCCTGCGG ATGATCCGCA AGCGCGCCCC CCATATCCAC TTCCACTTCG AGGTGCGGAG CGAGTTTCTG GACCGGGAGA TGGCCCGGCT TTTTGCCGGC ATTACCTGCT CTCTCCAGAT CGGCCTCCAG AGTGCCGACC CGGCCATCCT CAAGGGGATA CGGCGGCATT TCGATCCGGA CGACTTTCGA AAACGAGTCG CGCTTCTCAA CGAAAGCGGG GCCGTCTTCG GCTTTGATCT CATCTACGGA CTCCCCGGCG ACTCCCTCGC AGGCTTCAGG CAATCCCTCG ACTTCGCCCT CGCCCTCTAC CCGAACCATC TGGACATCTT CCCCCTTGCC GTTCTCCCCG GCACCCCCCT TGCCGCCCGC GCGGCTCAGG CAGGGCTCGA CCACCTTCCG GCGCCCCCCT ACGCGCTTAC CGCCACCCCG ACGTTTCCGG CCCCGGACAT GAAACGTGCC GCCCGCCTTG CCGGAGCCTG CGACATCTTC TATAGCCGGG GAAAAGCGGT CGCCTGGTTC AACGGCGTCA TTGCCCCCCT TTCCCTGACG CCGGCAGAGT TTCTCGACGC CTTCGGCGGA TGGCTCGCAC GCCAAGGGAT TGAAGCCCGG GAGGAGGCCT TGGGCGACGA GGCGATCTGG TCGCTGCAGC GCTCGTTTCT TGCCCACATC TTTGCCGACC GGCGGGTGCG TCGTCTTCTC CCCGTGGCTC TCGACCTGGT CGATTATCAC TATCATTACG CGGCGGCGCT TCTGGCGCCG CCGCCGGAGC TTCCCACCGA CCGCAGCCTC GCCGGCTTGA ATATTCTCGA TCAGGTAGTG TGTCTTGCTC CATCCACGAG GCTTGCCCGC TTCTCCTATG AAATCACCGA TCTGCTGGAA GCGGGCAACG CAGACCTTCG GGAAATCTGT GCATGTTTCT CGCCCAGTCC GTCATGGGCC GTCATTTATC CCCGCGGCAA CGACATATTT ACCGAATCTC TCCTGGAGTC CTATTTCCTT CTTCTCGAGG GGCTCGACGG CTGCTGCCGG GCCGGTGATG TCGTTGCGCG ACTCGCCCTT TCCGGAGAGG GGGCAGCGGA ATTCCTCAAA TTTGCCGCCG CGGAGGGGAT TGTCACGGTA CGGAACTGCC CCTGA
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Protein sequence | MKVVLAAIHP VPSPQAVPLA NAFLKAYLGT DEELAARVAV TLCDFLRSTP ADVCAAEILA HEPDAVGFSL YLWNTEESGR IAAELRRNRP GITIFAGGPQ ATADPLGTLT GGGYDFLILG EGEVPFLEVT ARLADGRPFR GAPGTAWLDD GKLASRPQKP VALLDTIPSP FLSGIIEPGR YGGLLWQLSR GCDFACEYCF DYKGTKGVRR FSLERVDAEL DFLVRHNVPQ VFVLDSTFNV DAKRAKTILR MIRKRAPHIH FHFEVRSEFL DREMARLFAG ITCSLQIGLQ SADPAILKGI RRHFDPDDFR KRVALLNESG AVFGFDLIYG LPGDSLAGFR QSLDFALALY PNHLDIFPLA VLPGTPLAAR AAQAGLDHLP APPYALTATP TFPAPDMKRA ARLAGACDIF YSRGKAVAWF NGVIAPLSLT PAEFLDAFGG WLARQGIEAR EEALGDEAIW SLQRSFLAHI FADRRVRRLL PVALDLVDYH YHYAAALLAP PPELPTDRSL AGLNILDQVV CLAPSTRLAR FSYEITDLLE AGNADLREIC ACFSPSPSWA VIYPRGNDIF TESLLESYFL LLEGLDGCCR AGDVVARLAL SGEGAAEFLK FAAAEGIVTV RNCP
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